Non-Coding RNA Search

Ss1.1-rece02_o9.5

Sequence:


               
               CGTAGCTGGTCTTTGTTTTCCCCCCTCCCCCCATCCATGTATATCATATTATGTGAGATA
TCATCTGCCTGAAAAAAGACCTTGTGCGGATTATTGGGAACATTGTAGCTGTTTCTGTGT
TTTTTCTTACCTTGTAGTCTGGTTCTGAATTAAGAGAGAAAAAAAAAAAGTAATTATGAT
ACATTGTAGTTTGTGTACAATATATGTTGATAACGTTTTATTAAAGGGACATTTTTTTTC
CGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGGAAAAT
AAAAAGGGGGGGGGGGGGGGGCCCCCCCCCCCCCCCCCCCCCGTTTTTTTTTGAAAGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTAGCTGGTCTTTGTTTTCCCCCCTCCCCCCATCCATGTATATCATATTATGTGAGATA
TCATCTGCCTGAAAAAAGACCTTGTGCGGATTATTGGGAACATTGTAGCTGTTTCTGTGT
TTTTTCTTACCTTGTAGTCTGGTTCTGAATTAAGAGAGAAAAAAAAAAAGTAATTATGAT
ACATTGTAGTTTGTGTACAATATATGTTGATAACGTTTTATTAAAGGGACATTTTTTTTC
CGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGGAAAAT
AAAAAGGGGGGGGGGGGGGGGCCCCCCCCCCCCCCCCCCCCCGTTTTTTTTTGAAAGGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-244, gnl|bosTau2|chr3 (60873847-60874092)
               

               
               2-244, gnl|Hg17|chr1 (54403369-54403126)
               

               
               2-244, gnl|Mm7|chr4 (106425888-106426133)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-244, gnl|bosTau2|chr3 (60873847-60874092)
               

               
               2-244, gnl|Hg17|chr1 (54403369-54403126)
               

               
               2-244, gnl|Mm7|chr4 (106425888-106426133)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               cst (0.140036)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               cst (0.140036)

	2-244, gnl\|bosTau2\|chr3 (60873847-60874092)
	2-244, gnl\|Hg17\|chr1 (54403369-54403126)
	2-244, gnl\|Mm7\|chr4 (106425888-106426133)