Non-Coding RNA Search

Ss1.1-rece03_i12.5

Sequence:


               
               GACCATCTGGGCCTCAGCGTCTTCTCCATGCTCTGCTGCTTCTGGCCTCTGGGCATCGCG
GCTTTCTACCTGTCCCACGAGACCAACAAAGCCGTGGCCAAGGGCGACTTCCACCAGGCC
AGCACCAGCTCCCGGCGGGCCCTGTTCCTGGCCGTGCTCTCCATCACCATCGGGACGGGC
ATCTACGTGGGCGTGGCCGTGGCCCTCATCGCCTACCTCTCCAAGAACAACCACCTATGA
GCCTCCCAGGCGCATGGAAGAGCCTGGGCCAGTCGTGTGCGGGCGCAGAGGAGTGGGGCT
GGCAAGGGTGGACGCACAGGGGGACACGCCTGTGTGATGCTGTCGTCGCCGACGAGGCCA
CAAAGCCCTGGGACTTTCTGCCTGTGGTTCCCTTTGTTTTCACCCTTCATGCCGTTTTCA
CGGCGCTGTGTAGAGCGCGGGATGGGTGGGCACTGCTAACCCTTCCACACGGAAACTCCA
AAGATCCCGACCCACGAGGCTGTCTCCAGACAGATTCCGGTGGACGAGTGACAGCGCCCG
TGCCTGGAATGCCATAGCGTTAGCAATACACCAACAGGAACATGTTTTATTTTGTACATA
TTCCGATGCAGTAGGCATAGGGCTGGGGACACGTACTCCTGTCTGTGGCTCCACATCCCC
GCTCTGGCACCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACCATCTGGGCCTCAGCGTCTTCTCCATGCTCTGCTGCTTCTGGCCTCTGGGCATCGCG
GCTTTCTACCTGTCCCACGAGACCAACAAAGCCGTGGCCAAGGGCGACTTCCACCAGGCC
AGCACCAGCTCCCGGCGGGCCCTGTTCCTGGCCGTGCTCTCCATCACCATCGGGACGGGC
ATCTACGTGGGCGTGGCCGTGGCCCTCATCGCCTACCTCTCCAAGAACAACCACCTATGA
GCCTCCCAGGCGCATGGAAGAGCCTGGGCCAGTCGTGTGCGGGCGCAGAGGAGTGGGGCT
GGCAAGGGTGGACGCACAGGGGGACACGCCTGTGTGATGCTGTCGTCGCCGACGAGGCCA
CAAAGCCCTGGGACTTTCTGCCTGTGGTTCCCTTTGTTTTCACCCTTCATGCCGTTTTCA
CGGCGCTGTGTAGAGCGCGGGATGGGTGGGCACTGCTAACCCTTCCACACGGAAACTCCA
AAGATCCCGACCCACGAGGCTGTCTCCAGACAGATTCCGGTGGACGAGTGACAGCGCCCG
TGCCTGGAATGCCATAGCGTTAGCAATACACCAACAGGAACATGTTTTATTTTGTACATA
TTCCGATGCAGTAGGCATAGGGCTGGGGACACGTACTCCTGTCTGTGGCTCCACATCCCC
GCTCTGGCACCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47219159|emb|CAG01822.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47219159|emb|CAG01822.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               31-669, gnl|bosTau2|chr13 (28279815-28279161)
               

               
               31-669, gnl|Hg17|chr20 (24593926-24594581)
               

               
               31-669, gnl|Mm7|chr2 (149743974-149744626)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-669, gnl|bosTau2|chr13 (28279815-28279161)
               

               
               31-669, gnl|Hg17|chr20 (24593926-24594581)
               

               
               31-669, gnl|Mm7|chr2 (149743974-149744626)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ece (0.45861)
               

               
               fcc (0.197785)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.45861)
               

               
               fcc (0.197785)
               

               
               ebs (0.118301)

	31-669, gnl\|bosTau2\|chr13 (28279815-28279161)
	31-669, gnl\|Hg17\|chr20 (24593926-24594581)
	31-669, gnl\|Mm7\|chr2 (149743974-149744626)