Non-Coding RNA Search

Ss1.1-rece04c_m16.5

Sequence:


               
               AATTAGGCATGTGGAACACCAAACAGGAGAGAACTATGTCTGAAATATAAAAATCAAAAA
ACAACCATGAATATGCACAAGGGACACACCAATGGAATGTCAGATAATTTTCACCAGTTT
TTATTTGGAGCTGTTTTATTGTGTAGACCATATTTACATATTTGGATAAGTACACAAAGC
ACCAATGCTGTTAATGGCCTTAGCAGAGGCTCATGCTGAAATTTGCCAGTAAAACAAAGA
AGTTTAAAGACTGGCAGGTCCAACATTATCACATAAGTGCTGTCAGTATAAAGTTGTGGG
GATAAAGGAAACTGGATATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCT
GTGCTGCTGATTAAGCCGTAATTAAAATTCTTCTCATCCCATGGGAGTTTTTAATAGAAG
CTTCCTCCTTCAATGGGCAGAAACTAAAGAAGATTTTAAGGGGCAAAAGTAATTACAATA
AAATAATTCACTGTTGTATTGATAACAAAAGGAATTAGTTATTCAAGGTATTTGAAGAAA
CTATAGGTATAGTGGTGAATACTCGCTGAAATGAATCCTAGGAAAAACAGTCCTTGGTTT
TTAATGTTCTTTTCATTCCCATCTAAATAATTTATAGAAATATAACCCTAATGGGACATG
TGTTACAGGAGCTATAATTGGCTGTGGTTTTGGTTACTCTGTATTTTATTCCTTTGGGTC
AGGTGAAGTGTGTCCAAAGAGTTACTTGCAAGTCTTTCACAATATGAGGATGCCCCCAGT
TACCACTCTGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTAGGCATGTGGAACACCAAACAGGAGAGAACTATGTCTGAAATATAAAAATCAAAAA
ACAACCATGAATATGCACAAGGGACACACCAATGGAATGTCAGATAATTTTCACCAGTTT
TTATTTGGAGCTGTTTTATTGTGTAGACCATATTTACATATTTGGATAAGTACACAAAGC
ACCAATGCTGTTAATGGCCTTAGCAGAGGCTCATGCTGAAATTTGCCAGTAAAACAAAGA
AGTTTAAAGACTGGCAGGTCCAACATTATCACATAAGTGCTGTCAGTATAAAGTTGTGGG
GATAAAGGAAACTGGATATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCT
GTGCTGCTGATTAAGCCGTAATTAAAATTCTTCTCATCCCATGGGAGTTTTTAATAGAAG
CTTCCTCCTTCAATGGGCAGAAACTAAAGAAGATTTTAAGGGGCAAAAGTAATTACAATA
AAATAATTCACTGTTGTATTGATAACAAAAGGAATTAGTTATTCAAGGTATTTGAAGAAA
CTATAGGTATAGTGGTGAATACTCGCTGAAATGAATCCTAGGAAAAACAGTCCTTGGTTT
TTAATGTTCTTTTCATTCCCATCTAAATAATTTATAGAAATATAACCCTAATGGGACATG
TGTTACAGGAGCTATAATTGGCTGTGGTTTTGGTTACTCTGTATTTTATTCCTTTGGGTC
AGGTGAAGTGTGTCCAAAGAGTTACTTGCAAGTCTTTCACAATATGAGGATGCCCCCAGT
TACCACTCTGAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               236-792, gnl|bosTau2|chr2 (48938825-48939383)
               

               
               236-792, gnl|Hg17|chr3 (175482115-175482871)
               

               
               236-792, gnl|Mm7|chr3 (25247357-25246882)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               236-792, gnl|bosTau2|chr2 (48938825-48939383)
               

               
               236-792, gnl|Hg17|chr3 (175482115-175482871)
               

               
               236-792, gnl|Mm7|chr3 (25247357-25246882)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               ebs (0.118301)

	236-792, gnl\|bosTau2\|chr2 (48938825-48939383)
	236-792, gnl\|Hg17\|chr3 (175482115-175482871)
	236-792, gnl\|Mm7\|chr3 (25247357-25246882)