Non-Coding RNA Search

Ss1.1-rece04c_n8.5

Sequence:


               
               AAATCAGCTCCTCCTCAGGTGAGAGTTGAATGAATTGACCACACAAACTCTGTGCTTTCT
TTTCTCTGTGGACTAAAGGTTTAAATACAAATGAATTTCATTCTAATCTAAATTTTAAAA
ATTGAAAAAGCATTACTCCTTAGCTACAGAAGAGAGGGTTTTTGCAGAGAAAATCAGTAC
AGTTTCTTTCAAGTGCTGTGAGCATAAGCATCTATCAGATTGCATCGCTGTGTCCTCATT
GAGGCTATAAGCAGTATCAGGCATTACCTGGTCCACCATGAGTATAGTTCTAGCTCAAAA
TTTTGATTTTGATCACTGCTTATATATTCTCATTCCTTGAATAAGAATTTTAATAAGTAT
TTATTTGATCAAATTCCACATATCCAAAAATAAAGCAGTTCCACAAAGCTAAAATTATGG
CACAAGAAATTGAAAACAAAAGTGGCGAAATTTCTTCCTAATGGTAATTTAAGATCACAT
CATCAGCGCTCGCCAGCATGTGCATGTGTTAAAAAACGTATAGAGAAACCTGTAATTATT
GTAATTGCTCTTTTTGCTTTATACTAACAAGCTTCAAACCATGTTCCAAACTAGTTGTTT
TGAAATAGTTATTTGTCAAGTCATCAAATCTCAGAAAGTAAATGGTAATGAGCTTACCAT
GTTTATATTCTGACTGTTGGTCATAGTATACAGCTTTTCAACTCCAGAAAGTTGAGAAAT
GAAAATGGTGGTTAATGATTTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATCAGCTCCTCCTCAGGTGAGAGTTGAATGAATTGACCACACAAACTCTGTGCTTTCT
TTTCTCTGTGGACTAAAGGTTTAAATACAAATGAATTTCATTCTAATCTAAATTTTAAAA
ATTGAAAAAGCATTACTCCTTAGCTACAGAAGAGAGGGTTTTTGCAGAGAAAATCAGTAC
AGTTTCTTTCAAGTGCTGTGAGCATAAGCATCTATCAGATTGCATCGCTGTGTCCTCATT
GAGGCTATAAGCAGTATCAGGCATTACCTGGTCCACCATGAGTATAGTTCTAGCTCAAAA
TTTTGATTTTGATCACTGCTTATATATTCTCATTCCTTGAATAAGAATTTTAATAAGTAT
TTATTTGATCAAATTCCACATATCCAAAAATAAAGCAGTTCCACAAAGCTAAAATTATGG
CACAAGAAATTGAAAACAAAAGTGGCGAAATTTCTTCCTAATGGTAATTTAAGATCACAT
CATCAGCGCTCGCCAGCATGTGCATGTGTTAAAAAACGTATAGAGAAACCTGTAATTATT
GTAATTGCTCTTTTTGCTTTATACTAACAAGCTTCAAACCATGTTCCAAACTAGTTGTTT
TGAAATAGTTATTTGTCAAGTCATCAAATCTCAGAAAGTAAATGGTAATGAGCTTACCAT
GTTTATATTCTGACTGTTGGTCATAGTATACAGCTTTTCAACTCCAGAAAGTTGAGAAAT
GAAAATGGTGGTTAATGATTTCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-741, gnl|bosTau2|chr24 (34937957-34938680)
               

               
               3-741, gnl|Hg17|chr18 (51136792-51136065)
               

               
               3-741, gnl|Mm7|chr18 (69988887-69989675)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-741, gnl|bosTau2|chr24 (34937957-34938680)
               

               
               3-741, gnl|Hg17|chr18 (51136792-51136065)
               

               
               3-741, gnl|Mm7|chr18 (69988887-69989675)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               lin (0.145603)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               lin (0.145603)

	3-741, gnl\|bosTau2\|chr24 (34937957-34938680)
	3-741, gnl\|Hg17\|chr18 (51136792-51136065)
	3-741, gnl\|Mm7\|chr18 (69988887-69989675)