Non-Coding RNA Search

Ss1.1-rece05c_j22.5

Sequence:


               
               CTTTAAAAGGATCTACTTTATAACTGAATCCTACGTTGTTCATATCTAGAATTACAGTAA
GGGTCTAGTGTATTATCCAGATCTTAAAAAAAAAAAAAAAAAAGGGGAAATTTTAAAAAA
AAGTCTTCAAGCTGGCAATGTATTTGAATTATAGTTTTCAGATTGTGGCTCCAGACCCTG
TGTCTCCCCATTTAAGTAGCACCTTTTAATAAATACTGTTTCTTTGTGTAGGCAAAAGCA
CAAGTGTTTCAACTGTATATAGCAGGAAAAAAAAGAGTTTACAGAGATAGCATTGCTGCA
CAGGATAATTGCTACTGAGTATTTCTTATATCCTTTGTGGAAGTGAAAGGTTTATTCTGT
CAAGTTCATTCTGTTCAACACTGTTTCCCTATTGTTTATGTATAGCAATTGGATGTTATT
GTTTTATCATTTATAAAATTGTACAATAAATTAAAACCCCATTTTTTTTCAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTAAAAGGATCTACTTTATAACTGAATCCTACGTTGTTCATATCTAGAATTACAGTAA
GGGTCTAGTGTATTATCCAGATCTTAAAAAAAAAAAAAAAAAAGGGGAAATTTTAAAAAA
AAGTCTTCAAGCTGGCAATGTATTTGAATTATAGTTTTCAGATTGTGGCTCCAGACCCTG
TGTCTCCCCATTTAAGTAGCACCTTTTAATAAATACTGTTTCTTTGTGTAGGCAAAAGCA
CAAGTGTTTCAACTGTATATAGCAGGAAAAAAAAGAGTTTACAGAGATAGCATTGCTGCA
CAGGATAATTGCTACTGAGTATTTCTTATATCCTTTGTGGAAGTGAAAGGTTTATTCTGT
CAAGTTCATTCTGTTCAACACTGTTTCCCTATTGTTTATGTATAGCAATTGGATGTTATT
GTTTTATCATTTATAAAATTGTACAATAAATTAAAACCCCATTTTTTTTCAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-471, gnl|bosTau2|chr7 (62159246-62158783)
               

               
               1-471, gnl|Hg17|chr5 (100171266-100170805)
               

               
               1-471, gnl|Mm7|chr1 (95438071-95437603)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-471, gnl|bosTau2|chr7 (62159246-62158783)
               

               
               1-471, gnl|Hg17|chr5 (100171266-100170805)
               

               
               1-471, gnl|Mm7|chr1 (95438071-95437603)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               ece (0.229305)
               

               
               ton (0.1755)
               

               
               ret (0.128733)
               

               
               cty (0.10408)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               ton (0.1755)
               

               
               ret (0.128733)
               

               
               cty (0.10408)

	1-471, gnl\|bosTau2\|chr7 (62159246-62158783)
	1-471, gnl\|Hg17\|chr5 (100171266-100170805)
	1-471, gnl\|Mm7\|chr1 (95438071-95437603)