Non-Coding RNA Search

Ss1.1-rece09c_a21.5

Sequence:


               
               GAGCTGAACTGAGGTGGGGGAGGGCTTGGACACGGAAGTTGATTCTTTGGCTTCTTCTAG
GGAGGGTGGACAGACATCGTGAGACTGAAAGTTGATCATGAAAGATGTCCTGGGGAACTG
TGACTGCCGTGTATCAGCAAGGATTGTTTAGCTAGAATGGAGGGACTTAGAAGAGAGAAG
TCAGAACAATGTAGGGAGACTTTCCCTTCCCCATCTCATGCCCTGGCAGTAGCCTCTTCG
TCTTCTCTTTAGCTACCCGCCCAACTTCCAACCCAAAGGGCCCAGAGTCTGACTGCCCTT
TGCCCTCCCAGAGCGTCTCAGCCTCCACCTGCCTTGGGCTCCGCCTGGCATCCCCCCACC
CTCAAACTCCCCCCAGTTTTTTGTGTAAATGGAGCATATTTTATGTGCGAATATTTTAGT
AACCATATGTTCTGCAAGTAAACCTGTGTTAATACTTGTCAACAACTGCAGAGTTTATGA
TACCAATAATACTTCCTACAATGAAGAGAAAAAAAAAACATTTGTTTGTTTTCTAAGAAT
GTTTATTTGTAAACATATGTATTCACTATATTAATATGAATTTCTTACCTGGCAATAAAA
CTGATTATATGTGAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCTGAACTGAGGTGGGGGAGGGCTTGGACACGGAAGTTGATTCTTTGGCTTCTTCTAG
GGAGGGTGGACAGACATCGTGAGACTGAAAGTTGATCATGAAAGATGTCCTGGGGAACTG
TGACTGCCGTGTATCAGCAAGGATTGTTTAGCTAGAATGGAGGGACTTAGAAGAGAGAAG
TCAGAACAATGTAGGGAGACTTTCCCTTCCCCATCTCATGCCCTGGCAGTAGCCTCTTCG
TCTTCTCTTTAGCTACCCGCCCAACTTCCAACCCAAAGGGCCCAGAGTCTGACTGCCCTT
TGCCCTCCCAGAGCGTCTCAGCCTCCACCTGCCTTGGGCTCCGCCTGGCATCCCCCCACC
CTCAAACTCCCCCCAGTTTTTTGTGTAAATGGAGCATATTTTATGTGCGAATATTTTAGT
AACCATATGTTCTGCAAGTAAACCTGTGTTAATACTTGTCAACAACTGCAGAGTTTATGA
TACCAATAATACTTCCTACAATGAAGAGAAAAAAAAAACATTTGTTTGTTTTCTAAGAAT
GTTTATTTGTAAACATATGTATTCACTATATTAATATGAATTTCTTACCTGGCAATAAAA
CTGATTATATGTGAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-614, gnl|bosTau2|chr11 (63963723-63964332)
               

               
               1-614, gnl|Hg17|chr16 (13240099-13241774)
               

               
               1-614, gnl|Mm7|chr16 (11820612-11821129)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-614, gnl|bosTau2|chr11 (63963723-63964332)
               

               
               1-614, gnl|Hg17|chr16 (13240099-13241774)
               

               
               1-614, gnl|Mm7|chr16 (11820612-11821129)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ece (0.229305)
               

               
               fhi (0.169578)
               

               
               hyp (0.142837)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               fhi (0.169578)
               

               
               hyp (0.142837)

	1-614, gnl\|bosTau2\|chr11 (63963723-63964332)
	1-614, gnl\|Hg17\|chr16 (13240099-13241774)
	1-614, gnl\|Mm7\|chr16 (11820612-11821129)