Non-Coding RNA Search

Ss1.1-rece14c_b15.5

Sequence:


               
               CTATGGCTGCCCTGACCTCCCCAGGACTGTATTAGTTTGAGGTGGTGGGAGTTCAGATTG
ATTGCTGAAAGTTCAGTAACAGTGCTGGTCTTTAGCCCTAATGAAAGTTTTCATACCCAA
GAAGTATTCTCCATATGCATGTTTGAGGTGACTCTGGAGTAGATTAGGAAGCCATATCTC
ACAATGTCAAAAGACGTTACAGAACTTCTGTACTTGCTGCTTAACCTCAATATAACAGGC
TCAAACTAGGGGAAGGGAAACAAAGTAAAACTGACCATCGTAAGCAGAAAATAATGCTAA
CCTGCTTGGCTTCTTTCTTAAGCACTGTAAAGTGAAAGCAAATAACACAAAGATATCTTT
AAATTTGACTTGTCTCAAAGGCAGCACACCTGTCCTTGGGCCATTATTTGGACTAGGAGC
CCTTTACAAAACTATATGATTAGAAGGATTAGAACCCCCAGTTCTATCATCAGCTTATCT
AGACAACACAGATTATAACAGTTTGGATAAACTGAAAATTCTTCTGTGAGAGTTGAATTT
AAGTTTCAGAGAATAATCATTACCATGTGGGAGGCTTTTTTTTTAATGCAGAAGAAATCT
CAAAATATTGTATTTATATCTACCTTCCACTGATGCTGATATAGTAAGCATCTCCTACAT
GACAATAAACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTATGGCTGCCCTGACCTCCCCAGGACTGTATTAGTTTGAGGTGGTGGGAGTTCAGATTG
ATTGCTGAAAGTTCAGTAACAGTGCTGGTCTTTAGCCCTAATGAAAGTTTTCATACCCAA
GAAGTATTCTCCATATGCATGTTTGAGGTGACTCTGGAGTAGATTAGGAAGCCATATCTC
ACAATGTCAAAAGACGTTACAGAACTTCTGTACTTGCTGCTTAACCTCAATATAACAGGC
TCAAACTAGGGGAAGGGAAACAAAGTAAAACTGACCATCGTAAGCAGAAAATAATGCTAA
CCTGCTTGGCTTCTTTCTTAAGCACTGTAAAGTGAAAGCAAATAACACAAAGATATCTTT
AAATTTGACTTGTCTCAAAGGCAGCACACCTGTCCTTGGGCCATTATTTGGACTAGGAGC
CCTTTACAAAACTATATGATTAGAAGGATTAGAACCCCCAGTTCTATCATCAGCTTATCT
AGACAACACAGATTATAACAGTTTGGATAAACTGAAAATTCTTCTGTGAGAGTTGAATTT
AAGTTTCAGAGAATAATCATTACCATGTGGGAGGCTTTTTTTTTAATGCAGAAGAAATCT
CAAAATATTGTATTTATATCTACCTTCCACTGATGCTGATATAGTAAGCATCTCCTACAT
GACAATAAACAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-669, gnl|bosTau2|chr23 (9368088-9368773)
               

               
               1-669, gnl|Hg17|chr6 (35328041-35328714)
               

               
               1-669, gnl|Mm7|chr17 (26359759-26360363)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-669, gnl|bosTau2|chr23 (9368088-9368773)
               

               
               1-669, gnl|Hg17|chr6 (35328041-35328714)
               

               
               1-669, gnl|Mm7|chr17 (26359759-26360363)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ece (0.229305)
               

               
               mga (0.160205)
               

               
               ret (0.128733)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               mga (0.160205)
               

               
               ret (0.128733)

	1-669, gnl\|bosTau2\|chr23 (9368088-9368773)
	1-669, gnl\|Hg17\|chr6 (35328041-35328714)
	1-669, gnl\|Mm7\|chr17 (26359759-26360363)