Non-Coding RNA Search

Ss1.1-rece16c_p14.5

Sequence:


               
               CGTGGATTTGGACCTGCGAGCGGGTTCCGACCTCAAGGCGCTGCGTGGGCTCGTGGAGAA
CGCCGCTTACCTGGGCTATTCAGTTGTTGCCATCAATCATGTTGTTGAATTTAAGGAAAA
GAAACAGGAAATTGAAAAACCAGTAGCTGTTTCGGAGCTTTTTACAACTTTGCCAGTTGT
ACAGGGAAAATCAAAACCAATTAAAATTTTGACTAGACTGACAATTATTGTTTCCGATCC
ATCTCACTGCAATGTTTTGAGAACAACTTCTTCAAGGGTCCGGCTGTATGATATCATTGC
AGTTTTTCCAAAGACAGAAAAACTTTTTCACGTTGCTTGTACCCATTTAGATGTGGATAT
AGTCTGCATAACTGTAACAGAGAAACTACCATTTTACTTCAAAAGACCCCCTATTAATGT
GGCAATTGACCGAGGCGTGGCCTTTGAACTTGTCTATAGCCCCGCTATCAAAGACTCCAC
AATGAGAAGGTACACAATTTCCAATGCCCTCAATTTGATGCAGATCTGCAAAGGAAAGAA
TGTAATTGTATCTAGTGCTGCAGAAAGGCCTTTAGAAATAAGAGGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTGGATTTGGACCTGCGAGCGGGTTCCGACCTCAAGGCGCTGCGTGGGCTCGTGGAGAA
CGCCGCTTACCTGGGCTATTCAGTTGTTGCCATCAATCATGTTGTTGAATTTAAGGAAAA
GAAACAGGAAATTGAAAAACCAGTAGCTGTTTCGGAGCTTTTTACAACTTTGCCAGTTGT
ACAGGGAAAATCAAAACCAATTAAAATTTTGACTAGACTGACAATTATTGTTTCCGATCC
ATCTCACTGCAATGTTTTGAGAACAACTTCTTCAAGGGTCCGGCTGTATGATATCATTGC
AGTTTTTCCAAAGACAGAAAAACTTTTTCACGTTGCTTGTACCCATTTAGATGTGGATAT
AGTCTGCATAACTGTAACAGAGAAACTACCATTTTACTTCAAAAGACCCCCTATTAATGT
GGCAATTGACCGAGGCGTGGCCTTTGAACTTGTCTATAGCCCCGCTATCAAAGACTCCAC
AATGAGAAGGTACACAATTTCCAATGCCCTCAATTTGATGCAGATCTGCAAAGGAAAGAA
TGTAATTGTATCTAGTGCTGCAGAAAGGCCTTTAGAAATAAGAGGCCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|15717970|emb|CAC70100.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|15717970|emb|CAC70100.1|

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               36-421, gnl|bosTau2|chr9 (42567305-42567690)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-421, gnl|bosTau2|chr9 (42567305-42567690)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ece (0.229305)
               

               
               nco (0.161734)
               

               
               pla (0.133672)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               nco (0.161734)
               

               
               pla (0.133672)