Ss1.1-rece17c_n3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAACTGGAAAAGGACCTTCGAAAGAAAGCAGAGTCATTTGCACAAGAGATGTTTATTGG AACAAAACAAGCTAAAGAGACAAAGCCACCTTCTACTGCAGAGTTCTGCTCCTGACCAGC AGCTTTTAAAAGCTTTAGATGAAAATGCAAAACTCATCCAGCTCCTTGAAGAAGAGAGAA TTCAGCATCAACAGAAGGTCAAGGAATTAGAAGAGCAGCTACAAAATGAAACTCTCCACA AAGAGATACACAGCCTCAAACAGCAGCTGGAGCTTCTAGAAGAAGATAAAAAAGAATTGG AATTAAAATATCAGAATTCCGAGGAGAAAGCTAGAAATTTAAAGCATTCCGTCGATGAAC TCCAGAAACGAGTGAACCAGTCTGAGAATTCAGTACCTCCACCACCTCCTCCTCCACCAC CACTTCCCCCTCCTCCCCCCAATCCTATCCGATCCCTCATGTCCATGATCCGGAAGCGAT CCCACCCCAGCGGCAGTGGTGCTAAGAAAGAAAAGGCAGCTCAACCAGAAACAGCTGAAG AAGTCACAGATCTCAAGAGGCAAGCTGTTGAAGAGATGATGGACAGAATTAAAAAGGGAG TTCATCTCAGACCAGTAAATCAGACAGCTAGACCGAAGGCAAAGCCAGAATCTTCAAAAG GCTCTGAGAGTGCAGTGAATGAACTGAAAGGAATACTGGCCTCCCAGTAGCACTGGATGC AGGAGACAATACATTGGCAGTGAAAAACAAGCTGAACCAGTTGTAGTTTTAGATCCTGTT TCCACATATGAACCCCAAACCAAAGACCAGGTTGCTGAAAAAGATCCAACTCAACACAAG GATGGTGAAGGCGAAATTAAACCAGAATACAAAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAACTGGAAAAGGACCTTCGAAAGAAAGCAGAGTCATTTGCACAAGAGATGTTTATTGG AACAAAACAAGCTAAAGAGACAAAGCCACCTTCTACTGCAGAGTTCTGCTCCTGACCAGC AGCTTTTAAAAGCTTTAGATGAAAATGCAAAACTCATCCAGCTCCTTGAAGAAGAGAGAA TTCAGCATCAACAGAAGGTCAAGGAATTAGAAGAGCAGCTACAAAATGAAACTCTCCACA AAGAGATACACAGCCTCAAACAGCAGCTGGAGCTTCTAGAAGAAGATAAAAAAGAATTGG AATTAAAATATCAGAATTCCGAGGAGAAAGCTAGAAATTTAAAGCATTCCGTCGATGAAC TCCAGAAACGAGTGAACCAGTCTGAGAATTCAGTACCTCCACCACCTCCTCCTCCACCAC CACTTCCCCCTCCTCCCCCCAATCCTATCCGATCCCTCATGTCCATGATCCGGAAGCGAT CCCACCCCAGCGGCAGTGGTGCTAAGAAAGAAAAGGCAGCTCAACCAGAAACAGCTGAAG AAGTCACAGATCTCAAGAGGCAAGCTGTTGAAGAGATGATGGACAGAATTAAAAAGGGAG TTCATCTCAGACCAGTAAATCAGACAGCTAGACCGAAGGCAAAGCCAGAATCTTCAAAAG GCTCTGAGAGTGCAGTGAATGAACTGAAAGGAATACTGGCCTCCCAGTAGCACTGGATGC AGGAGACAATACATTGGCAGTGAAAAACAAGCTGAACCAGTTGTAGTTTTAGATCCTGTT TCCACATATGAACCCCAAACCAAAGACCAGGTTGCTGAAAAAGATCCAACTCAACACAAG GATGGTGAAGGCGAAATTAAACCAGAATACAAAGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 43 entry(ies) | More info |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
| 196-351, gnl|bosTau2|chr26 (24173569-24173414) | |
| 196-351, gnl|canFam2|chr28 (30467147-30467251) | |
| 196-351, gnl|dasNov1|scaffold_891 (24683-24579) | |
| 196-351, gnl|echTel1|scaffold_208957 (3082-2979) | |
| 196-351, gnl|galGal2|chr6 (28049206-28049310) | |
| 196-351, gnl|hg17|chr10 (118679345-118679449) | |
| 196-351, gnl|Hg17|chr10 (118679505-118679350) | |
| 196-351, gnl|loxAfr1|scaffold_241 (70363-70467) | |
| 196-351, gnl|mm7|chr19 (58941018-58941122) | |
| 196-351, gnl|Mm7|chr19 (58941178-58941023) | |
| 196-351, gnl|monDom2|scaffold_14 (44304413-44304309) | |
| 196-351, gnl|oryCun1|scaffold_205400 (145960-146064) | |
| 196-351, gnl|panTro1|chr8 (120867472-120867576) | |
| 196-351, gnl|rheMac2|chr9 (116562704-116562808) | |
| 196-351, gnl|rn3|chr1 (265749941-265750045) | |
| 530-644, gnl|bosTau2|chr26 (24160079-24159965) | |
| 530-644, gnl|canFam2|chr28 (30452901-30453045) | |
| 530-644, gnl|dasNov1|scaffold_891 (37349-37204) | |
| 530-644, gnl|galGal2|chr6 (28044222-28044360) | |
| 530-644, gnl|hg17|chr10 (118664859-118665004) | |
| 530-644, gnl|Hg17|chr10 (118664990-118664876) | |
| 530-644, gnl|loxAfr1|scaffold_241 (55757-55902) | |
| 530-644, gnl|mm7|chr19 (58926027-58926186) | |
| 530-644, gnl|Mm7|chr19 (58926172-58926058) | |
| 530-644, gnl|monDom2|scaffold_14 (44317382-44317237) | |
| 530-644, gnl|oryCun1|scaffold_205400 (129468-129613) | |
| 530-644, gnl|panTro1|chr8 (120852589-120852734) | |
| 530-644, gnl|rheMac2|chr9 (116547271-116547416) | |
| 698-873, gnl|bosTau2|chr26 (24130160-24129985) | |
| 698-873, gnl|canFam2|chr28 (30424806-30425015) | |
| 698-873, gnl|dasNov1|scaffold_891 (65638-65429) | |
| 698-873, gnl|echTel1|scaffold_321247 (7741-7532) | |
| 698-873, gnl|galGal2|chr6 (28032510-28032707) | |
| 698-873, gnl|hg17|chr10 (118635875-118636084) | |
| 698-873, gnl|Hg17|chr10 (118636068-118635893) | |
| 698-873, gnl|loxAfr1|scaffold_241 (26747-26956) | |
| 698-873, gnl|mm7|chr19 (58897234-58897442) | |
| 698-873, gnl|Mm7|chr19 (58897427-58897252) | |
| 698-873, gnl|monDom2|scaffold_14 (44348610-44348401) | |
| 698-873, gnl|oryCun1|scaffold_205400 (100957-101161) | |
| 698-873, gnl|panTro1|chr8 (120823820-120824029) | |
| 698-873, gnl|rheMac2|chr9 (116518558-116518767) | |
| 698-873, gnl|rn3|chr1 (265704567-265704781) |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 196-351, gnl|bosTau2|chr26 (24173569-24173414) | |
| 196-351, gnl|canFam2|chr28 (30467147-30467251) | |
| 196-351, gnl|dasNov1|scaffold_891 (24683-24579) | |
| 196-351, gnl|echTel1|scaffold_208957 (3082-2979) | |
| 196-351, gnl|galGal2|chr6 (28049206-28049310) | |
| 196-351, gnl|hg17|chr10 (118679345-118679449) | |
| 196-351, gnl|Hg17|chr10 (118679505-118679350) | |
| 196-351, gnl|loxAfr1|scaffold_241 (70363-70467) | |
| 196-351, gnl|mm7|chr19 (58941018-58941122) | |
| 196-351, gnl|Mm7|chr19 (58941178-58941023) | |
| 196-351, gnl|monDom2|scaffold_14 (44304413-44304309) | |
| 196-351, gnl|oryCun1|scaffold_205400 (145960-146064) | |
| 196-351, gnl|panTro1|chr8 (120867472-120867576) | |
| 196-351, gnl|rheMac2|chr9 (116562704-116562808) | |
| 196-351, gnl|rn3|chr1 (265749941-265750045) | |
| 530-644, gnl|bosTau2|chr26 (24160079-24159965) | |
| 530-644, gnl|canFam2|chr28 (30452901-30453045) | |
| 530-644, gnl|dasNov1|scaffold_891 (37349-37204) | |
| 530-644, gnl|galGal2|chr6 (28044222-28044360) | |
| 530-644, gnl|hg17|chr10 (118664859-118665004) | |
| 530-644, gnl|Hg17|chr10 (118664990-118664876) | |
| 530-644, gnl|loxAfr1|scaffold_241 (55757-55902) | |
| 530-644, gnl|mm7|chr19 (58926027-58926186) | |
| 530-644, gnl|Mm7|chr19 (58926172-58926058) | |
| 530-644, gnl|monDom2|scaffold_14 (44317382-44317237) | |
| 530-644, gnl|oryCun1|scaffold_205400 (129468-129613) | |
| 530-644, gnl|panTro1|chr8 (120852589-120852734) | |
| 530-644, gnl|rheMac2|chr9 (116547271-116547416) | |
| 698-873, gnl|bosTau2|chr26 (24130160-24129985) | |
| 698-873, gnl|canFam2|chr28 (30424806-30425015) | |
| 698-873, gnl|dasNov1|scaffold_891 (65638-65429) | |
| 698-873, gnl|echTel1|scaffold_321247 (7741-7532) | |
| 698-873, gnl|galGal2|chr6 (28032510-28032707) | |
| 698-873, gnl|hg17|chr10 (118635875-118636084) | |
| 698-873, gnl|Hg17|chr10 (118636068-118635893) | |
| 698-873, gnl|loxAfr1|scaffold_241 (26747-26956) | |
| 698-873, gnl|mm7|chr19 (58897234-58897442) | |
| 698-873, gnl|Mm7|chr19 (58897427-58897252) | |
| 698-873, gnl|monDom2|scaffold_14 (44348610-44348401) | |
| 698-873, gnl|oryCun1|scaffold_205400 (100957-101161) | |
| 698-873, gnl|panTro1|chr8 (120823820-120824029) | |
| 698-873, gnl|rheMac2|chr9 (116518558-116518767) | |
| 698-873, gnl|rn3|chr1 (265704567-265704781) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| ute (0.132784) | |
| ebs (0.118301) |