Ss1.1-rece17c_p13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGCCGCAGACAGACGAGGCAGCACAGACCGACAGCCAGCCACTCCACCCCTCCGACCCC ACAGAGAAGCAGCAGCCCAAGCGGCTGCATGTCTCCAACATCCCCTTCCGGTTCAGGGAC CCCGACCTGCGGCAAATGTTCGGGCAATTCGGAAAAATTTTAGACGTGGAGATCATTTTT AACGAGCGGGGCTCCAAGGGTTTGGGGTTTGTAACTTTTGAAACTAGCTCAGATGCTGAC CGAGCCCGGGAGAAGCTGAATGGGACGATCGTAGAGGGACGGAAAATTGAGGTCAATAAC GCCACGGCCCGAGTCATGACCAACAAGAAGACTGCGAACCCCTACACCAACGGCTGGAAG CTAAACCCGGTGGTAGGCGCAGTCTACGGGCCTGAATTCTATGCAGTGACGGGGTTCCCC TACCCCACCACCGGGACAGCCGTGGCCTACAGGGGCGCGCACCTACGGGGCCGGGGCCGG GCTGTGTATAATACGTTCCGGGCTGCACCGCCCCCACCCCCCATCCCGACTTACGGAGCG GCACTGGAGCAAACGCTTGTTAAAATGCCAGTCCCATGGACAGGGCTGGCACCCTGCCCC CTCCCTCCTCAGCAGACACCGTAGCCGGACTACCCCACCTCTCCAGCGTTCCCACCACTT TCTTGTCCGTTTGCTTCCAGGGGTCGTGTATCAGGATGGCTTTTATGGTGCTGAGATTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGCCGCAGACAGACGAGGCAGCACAGACCGACAGCCAGCCACTCCACCCCTCCGACCCC ACAGAGAAGCAGCAGCCCAAGCGGCTGCATGTCTCCAACATCCCCTTCCGGTTCAGGGAC CCCGACCTGCGGCAAATGTTCGGGCAATTCGGAAAAATTTTAGACGTGGAGATCATTTTT AACGAGCGGGGCTCCAAGGGTTTGGGGTTTGTAACTTTTGAAACTAGCTCAGATGCTGAC CGAGCCCGGGAGAAGCTGAATGGGACGATCGTAGAGGGACGGAAAATTGAGGTCAATAAC GCCACGGCCCGAGTCATGACCAACAAGAAGACTGCGAACCCCTACACCAACGGCTGGAAG CTAAACCCGGTGGTAGGCGCAGTCTACGGGCCTGAATTCTATGCAGTGACGGGGTTCCCC TACCCCACCACCGGGACAGCCGTGGCCTACAGGGGCGCGCACCTACGGGGCCGGGGCCGG GCTGTGTATAATACGTTCCGGGCTGCACCGCCCCCACCCCCCATCCCGACTTACGGAGCG GCACTGGAGCAAACGCTTGTTAAAATGCCAGTCCCATGGACAGGGCTGGCACCCTGCCCC CTCCCTCCTCAGCAGACACCGTAGCCGGACTACCCCACCTCTCCAGCGTTCCCACCACTT TCTTGTCCGTTTGCTTCCAGGGGTCGTGTATCAGGATGGCTTTTATGGTGCTGAGATTTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 6-144, gnl|bosTau2|chr19 (46336764-46336626) | |
| 6-144, gnl|canFam2|chr9 (5355254-5355077) | |
| 6-144, gnl|danRer3|chr12 (30767380-30767223) | |
| 6-144, gnl|dasNov1|scaffold_132866 (1986-1809) | |
| 6-144, gnl|echTel1|scaffold_309948 (80871-80717) | |
| 6-144, gnl|fr1|chrUn (194798820-194798641) | |
| 6-144, gnl|hg17|chr17 (74614299-74614477) | |
| 6-144, gnl|Hg17|chr17 (74614466-74614328) | |
| 6-144, gnl|loxAfr1|scaffold_72904 (7788-7625) | |
| 6-144, gnl|mm7|chr11 (118614649-118614817) | |
| 6-144, gnl|Mm7|chr11 (118614806-118614668) | |
| 6-144, gnl|monDom2|scaffold_18 (8662614-8662792) | |
| 6-144, gnl|oryCun1|scaffold_192352 (7801-7979) | |
| 6-144, gnl|panTro1|chr19 (78178480-78178658) | |
| 6-144, gnl|rheMac2|chr16 (74361685-74361863) | |
| 6-144, gnl|rn3|chr10 (108523913-108524081) | |
| 6-144, gnl|tetNig1|chr3 (14251326-14251490) | |
| 6-144, gnl|xenTro1|scaffold_92 (1160309-1160468) | |
| 191-293, gnl|bosTau2|chr19 (46333468-46333366) | |
| 191-293, gnl|canFam2|chr9 (5357712-5357610) | |
| 191-293, gnl|danRer3|chr12 (30782130-30782028) | |
| 191-293, gnl|dasNov1|scaffold_132866 (4536-4434) | |
| 191-293, gnl|echTel1|scaffold_309948 (92231-92121) | |
| 191-293, gnl|fr1|chrUn (194805644-194805545) | |
| 191-293, gnl|galGal2|chrUn (17737042-17737144) | |
| 191-293, gnl|hg17|chr17 (74610835-74610937) | |
| 191-293, gnl|Hg17|chr17 (74610939-74610837) | |
| 191-293, gnl|loxAfr1|scaffold_33232 (38268-38370) | |
| 191-293, gnl|mm7|chr11 (118611883-118611985) | |
| 191-293, gnl|Mm7|chr11 (118611987-118611885) | |
| 191-293, gnl|monDom2|scaffold_18 (8659137-8659239) | |
| 191-293, gnl|oryCun1|scaffold_192352 (3470-3572) | |
| 191-293, gnl|panTro1|chr19 (78174990-78175092) | |
| 191-293, gnl|rheMac2|chr16 (74358218-74358320) | |
| 191-293, gnl|rn3|chr10 (108521137-108521239) | |
| 191-293, gnl|tetNig1|chr3 (14243600-14243699) | |
| 191-293, gnl|xenTro1|scaffold_92 (1156728-1156830) | |
| 540-720, gnl|bosTau2|chr19 (46326952-46326773) | |
| 540-720, gnl|Hg17|chr17 (74604510-74604331) | |
| 540-720, gnl|Mm7|chr11 (118605576-118605397) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-144, gnl|bosTau2|chr19 (46336764-46336626) | |
| 6-144, gnl|canFam2|chr9 (5355254-5355077) | |
| 6-144, gnl|danRer3|chr12 (30767380-30767223) | |
| 6-144, gnl|dasNov1|scaffold_132866 (1986-1809) | |
| 6-144, gnl|echTel1|scaffold_309948 (80871-80717) | |
| 6-144, gnl|fr1|chrUn (194798820-194798641) | |
| 6-144, gnl|hg17|chr17 (74614299-74614477) | |
| 6-144, gnl|Hg17|chr17 (74614466-74614328) | |
| 6-144, gnl|loxAfr1|scaffold_72904 (7788-7625) | |
| 6-144, gnl|mm7|chr11 (118614649-118614817) | |
| 6-144, gnl|Mm7|chr11 (118614806-118614668) | |
| 6-144, gnl|monDom2|scaffold_18 (8662614-8662792) | |
| 6-144, gnl|oryCun1|scaffold_192352 (7801-7979) | |
| 6-144, gnl|panTro1|chr19 (78178480-78178658) | |
| 6-144, gnl|rheMac2|chr16 (74361685-74361863) | |
| 6-144, gnl|rn3|chr10 (108523913-108524081) | |
| 6-144, gnl|tetNig1|chr3 (14251326-14251490) | |
| 6-144, gnl|xenTro1|scaffold_92 (1160309-1160468) | |
| 191-293, gnl|bosTau2|chr19 (46333468-46333366) | |
| 191-293, gnl|canFam2|chr9 (5357712-5357610) | |
| 191-293, gnl|danRer3|chr12 (30782130-30782028) | |
| 191-293, gnl|dasNov1|scaffold_132866 (4536-4434) | |
| 191-293, gnl|echTel1|scaffold_309948 (92231-92121) | |
| 191-293, gnl|fr1|chrUn (194805644-194805545) | |
| 191-293, gnl|galGal2|chrUn (17737042-17737144) | |
| 191-293, gnl|hg17|chr17 (74610835-74610937) | |
| 191-293, gnl|Hg17|chr17 (74610939-74610837) | |
| 191-293, gnl|loxAfr1|scaffold_33232 (38268-38370) | |
| 191-293, gnl|mm7|chr11 (118611883-118611985) | |
| 191-293, gnl|Mm7|chr11 (118611987-118611885) | |
| 191-293, gnl|monDom2|scaffold_18 (8659137-8659239) | |
| 191-293, gnl|oryCun1|scaffold_192352 (3470-3572) | |
| 191-293, gnl|panTro1|chr19 (78174990-78175092) | |
| 191-293, gnl|rheMac2|chr16 (74358218-74358320) | |
| 191-293, gnl|rn3|chr10 (108521137-108521239) | |
| 191-293, gnl|tetNig1|chr3 (14243600-14243699) | |
| 191-293, gnl|xenTro1|scaffold_92 (1156728-1156830) | |
| 540-720, gnl|bosTau2|chr19 (46326952-46326773) | |
| 540-720, gnl|Hg17|chr17 (74604510-74604331) | |
| 540-720, gnl|Mm7|chr11 (118605576-118605397) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) |