Non-Coding RNA Search

Ss1.1-rece21c_b15.5

Sequence:


               
               ATGCGTCACGTGACGCGACCGGGAAGCGGGCGCTGCGGAGGGCTGTGCTCCGGGAGTGGC
CGGCGACCGCCGCTGTCGGGCTGCGTTTCGTGGAGGCGGCGGCGGCGGCATGTTCACGGC
GGGGGCCGAGAGTCTGCTCCGTCAGGCCAGGGAGATCCGGGACGAGGAGCTGGGGAGGCT
CTGCTCCCGCGTCTGTGCGCTGCTGGGGAGGGAGGACTGGGGGCCCGACGCGCTCGATGC
CCTGCGGAGGCTCTTCCTCATCGTCTCGGCCACGAAGCACGGCAGGAGGCTGGAGCAGCC
GTGCGTGGAGCTGCTGCAGGCCGCCCTCTGCTCGCCCACCTGCCCCGAGCAGCTCCAGCT
CCTCTGCGCTGCTGTCCTGAGAGAGGTGTCGCCCTCCCGCAGCCTGAGCCTGACCTGTGA
CCGCGTCCAGAACACGCAGCAGCTGGGACTGGTGGCCTCTGTGCTCTTGGCCCAGGGCGA
CCGCAGGCAGGTCGGCAGCGTGGGCCAGTGCGCCCTCAGAGTCCTGAAGAGCCGGCAGCC
CGAGGGGCCCGGCCTGAGGCACCTTCTCCCGGTTGTGTCCAAGGTCACCAACCTGGCCCC
AGATGCCCTCCACGAAGAGCAGACCAACACGCTCAACAGAAGGCTGGGGGACTGGCTCCG
CCACGCCAGCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGCGTCACGTGACGCGACCGGGAAGCGGGCGCTGCGGAGGGCTGTGCTCCGGGAGTGGC
CGGCGACCGCCGCTGTCGGGCTGCGTTTCGTGGAGGCGGCGGCGGCGGCATGTTCACGGC
GGGGGCCGAGAGTCTGCTCCGTCAGGCCAGGGAGATCCGGGACGAGGAGCTGGGGAGGCT
CTGCTCCCGCGTCTGTGCGCTGCTGGGGAGGGAGGACTGGGGGCCCGACGCGCTCGATGC
CCTGCGGAGGCTCTTCCTCATCGTCTCGGCCACGAAGCACGGCAGGAGGCTGGAGCAGCC
GTGCGTGGAGCTGCTGCAGGCCGCCCTCTGCTCGCCCACCTGCCCCGAGCAGCTCCAGCT
CCTCTGCGCTGCTGTCCTGAGAGAGGTGTCGCCCTCCCGCAGCCTGAGCCTGACCTGTGA
CCGCGTCCAGAACACGCAGCAGCTGGGACTGGTGGCCTCTGTGCTCTTGGCCCAGGGCGA
CCGCAGGCAGGTCGGCAGCGTGGGCCAGTGCGCCCTCAGAGTCCTGAAGAGCCGGCAGCC
CGAGGGGCCCGGCCTGAGGCACCTTCTCCCGGTTGTGTCCAAGGTCACCAACCTGGCCCC
AGATGCCCTCCACGAAGAGCAGACCAACACGCTCAACAGAAGGCTGGGGGACTGGCTCCG
CCACGCCAGCGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               287-476, gnl|bosTau2|chr25 (37461435-37461246)
               

               
               287-476, gnl|Hg17|chr7 (4594438-4594627)
               

               
               287-476, gnl|Mm7|chr5 (141444187-141444376)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               287-476, gnl|bosTau2|chr25 (37461435-37461246)
               

               
               287-476, gnl|Hg17|chr7 (4594438-4594627)
               

               
               287-476, gnl|Mm7|chr5 (141444187-141444376)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	287-476, gnl\|bosTau2\|chr25 (37461435-37461246)
	287-476, gnl\|Hg17\|chr7 (4594438-4594627)
	287-476, gnl\|Mm7\|chr5 (141444187-141444376)