Non-Coding RNA Search

Ss1.1-rece22c_p24.5

Sequence:


               
               GCGGCTCGAGCCACGCTGCAGGACCACCGCAAGCACATCCACGAGGTGCACTCCAAGGAG
TACCACCCCTGCCCCACATGCGGGAAGATCTTCAGCGCCCCCTCCATGCTGGAGCGGCAC
CTGGTGACCCACGTCGGAGGGAAGCCCTTCAGCTGCGGCATCTGCAACAAGGCCTACCAG
CAATTGTCTGGTTTGTGGTACCACAACCGGACCCACCATCCTGACGTGTTTGCTGCTCAG
AACCATCGATCTTCCAAGTTCTCATCACTCCAATGCAGCTCCTGTGACAAAACTTTTTCC
AACACTATTGAGCACAAGAAGCACATCAAAGCAGAGCACGCAGATATGAAGTTCCACGAG
TGTAACCAGTGCAAGGAGCTCTTCCCCACGCCAGCTTTGCTGCAGGTTCACATCAAGTGC
CAGCATTCAGGGTCGCAGCCATTCCGGTGTCTGTACTGCGCAGCCACTTTCCGCTTCCCC
GGAGCACTGCAGCACCACGTCACCACCGAGCACTTCAAGCAGTCGGAGAGCACCTTCCCC
TGCGAGCTCTGTGGGGAGCTCTTCACCTCCCAGCCCCAGCGGGACTGTCACTTGGAATCT
GAACACCCAAAGGTGCCAGGCGCCGAAAGCCAGGCAGCAGCCTCACAGGTGATCCAAACC
CCAGAACCGGTGGCCGCGACAGAGCAGGTGATCACTCTGGAGGAGACCCAGCTTGCTGGT
TCGCAGGTGTTTGTGACATTGCCAGATTCACAGACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGCCACGCTGCAGGACCACCGCAAGCACATCCACGAGGTGCACTCCAAGGAG
TACCACCCCTGCCCCACATGCGGGAAGATCTTCAGCGCCCCCTCCATGCTGGAGCGGCAC
CTGGTGACCCACGTCGGAGGGAAGCCCTTCAGCTGCGGCATCTGCAACAAGGCCTACCAG
CAATTGTCTGGTTTGTGGTACCACAACCGGACCCACCATCCTGACGTGTTTGCTGCTCAG
AACCATCGATCTTCCAAGTTCTCATCACTCCAATGCAGCTCCTGTGACAAAACTTTTTCC
AACACTATTGAGCACAAGAAGCACATCAAAGCAGAGCACGCAGATATGAAGTTCCACGAG
TGTAACCAGTGCAAGGAGCTCTTCCCCACGCCAGCTTTGCTGCAGGTTCACATCAAGTGC
CAGCATTCAGGGTCGCAGCCATTCCGGTGTCTGTACTGCGCAGCCACTTTCCGCTTCCCC
GGAGCACTGCAGCACCACGTCACCACCGAGCACTTCAAGCAGTCGGAGAGCACCTTCCCC
TGCGAGCTCTGTGGGGAGCTCTTCACCTCCCAGCCCCAGCGGGACTGTCACTTGGAATCT
GAACACCCAAAGGTGCCAGGCGCCGAAAGCCAGGCAGCAGCCTCACAGGTGATCCAAACC
CCAGAACCGGTGGCCGCGACAGAGCAGGTGATCACTCTGGAGGAGACCCAGCTTGCTGGT
TCGCAGGTGTTTGTGACATTGCCAGATTCACAGACA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               11-180, gnl|bosTau2|chr2 (84379363-84379194)
               

               
               11-180, gnl|Hg17|chr1 (22591905-22592074)
               

               
               11-180, gnl|Mm7|chr4 (136367154-136366985)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-180, gnl|bosTau2|chr2 (84379363-84379194)
               

               
               11-180, gnl|Hg17|chr1 (22591905-22592074)
               

               
               11-180, gnl|Mm7|chr4 (136367154-136366985)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ece (0.229305)
               

               
               pla (0.133672)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               pla (0.133672)
               

               
               cty (0.10408)

	11-180, gnl\|bosTau2\|chr2 (84379363-84379194)
	11-180, gnl\|Hg17\|chr1 (22591905-22592074)
	11-180, gnl\|Mm7\|chr4 (136367154-136366985)