Non-Coding RNA Search

Ss1.1-rece38_k7.5

Sequence:


               
               GCCCACGCGTACGGCTGCCCAGCCCCCAACCTCCCTCAGGAACAGAGGGCATCAGGGGTC
TGAGGACCCTGACAGTGGGAAGGGGCAGCTCTTATGGGCTCCTGGTGGCCCAAGTATGGC
TGCTCAGGTTGAACGAGGGCCCGGGCGACCTTAACCCTCCAGCTCCCCACCTTAGGCGAC
CCATGTGGGGTCACCCCTGCATGGCACCAGCTCTGGGGCCCTCCTGTCAGCCGCTGTCGG
GTGTCCTGGAGGGGCACAGGGTGCCCCAGCCTGGCCTCAGCTCTCCACCCACAGGCCTGG
CTGACGGAGATCCAGGAGTACGCCCAGCGTGACGTGGTGCTCCTGCTGCTGGGGAACAAG
GTGGACTCTGCCCAGGAGCGGGTGGTGAGGAGGGAGGACGGGGAGCAGCTGGCCAAGGTG
AGTGGGGCTGGGTGGGCAGCGGGGAGCACCCCCGGGGCCGCGGGCCTGGGCTGCCCTGCC
AGGCTGCCCACGGCTCTTTGCAGGAGTTTGGGCTGCCATTCATGGAGACCAGTGCCAGGA
CGGGCCTCAATGTGGACTTGGCCTTCACGGCCGTAGCGAAGGAGTTGAAGCAGCGCTTGA
CCAAGGCCCCCAGCGAGCCTCGCTTTCAGCTCCATGACTATGTCAAGAGGGAGGGCCGGG
GGGCCTCCTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCACGCGTACGGCTGCCCAGCCCCCAACCTCCCTCAGGAACAGAGGGCATCAGGGGTC
TGAGGACCCTGACAGTGGGAAGGGGCAGCTCTTATGGGCTCCTGGTGGCCCAAGTATGGC
TGCTCAGGTTGAACGAGGGCCCGGGCGACCTTAACCCTCCAGCTCCCCACCTTAGGCGAC
CCATGTGGGGTCACCCCTGCATGGCACCAGCTCTGGGGCCCTCCTGTCAGCCGCTGTCGG
GTGTCCTGGAGGGGCACAGGGTGCCCCAGCCTGGCCTCAGCTCTCCACCCACAGGCCTGG
CTGACGGAGATCCAGGAGTACGCCCAGCGTGACGTGGTGCTCCTGCTGCTGGGGAACAAG
GTGGACTCTGCCCAGGAGCGGGTGGTGAGGAGGGAGGACGGGGAGCAGCTGGCCAAGGTG
AGTGGGGCTGGGTGGGCAGCGGGGAGCACCCCCGGGGCCGCGGGCCTGGGCTGCCCTGCC
AGGCTGCCCACGGCTCTTTGCAGGAGTTTGGGCTGCCATTCATGGAGACCAGTGCCAGGA
CGGGCCTCAATGTGGACTTGGCCTTCACGGCCGTAGCGAAGGAGTTGAAGCAGCGCTTGA
CCAAGGCCCCCAGCGAGCCTCGCTTTCAGCTCCATGACTATGTCAAGAGGGAGGGCCGGG
GGGCCTCCTGCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               359-585, gnl|bosTau2|chr25 (5105982-5105754)
               

               
               359-585, gnl|Hg17|chr16 (2142989-2143230)
               

               
               359-585, gnl|Mm7|chr17 (22710797-22710560)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               359-585, gnl|bosTau2|chr25 (5105982-5105754)
               

               
               359-585, gnl|Hg17|chr16 (2142989-2143230)
               

               
               359-585, gnl|Mm7|chr17 (22710797-22710560)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	359-585, gnl\|bosTau2\|chr25 (5105982-5105754)
	359-585, gnl\|Hg17\|chr16 (2142989-2143230)
	359-585, gnl\|Mm7\|chr17 (22710797-22710560)