Ss1.1-rece39_d19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAGACCGCGGCGCACTTGGACTTCCCTCTCCATTCGCTACCCGCCTCGCTCCCGGGCCC CACGGCTGCGAACTGATCTGGCGCGGGGGGAGGAGGAAAGCGCAGGCGAGCGACGAGCGA GAGAGGGAGAAGGCGAGCGAGCGAGAGAGCCGGAGAGAGAGCCAGAGAGCCGGGGGGCAG AGGGAGTAGTGACCGCCTTCCGGAGCCGGGATTCATGCCTGTCCTCGGGACCAGCGAAGG GGACTTTACGGCTGAGTATGAGCCAGGCTGCTAGGAGCCAGGTACCCCCACGCCTGCAGT CCCCGCGCCGTTCCCGGTATGCGAGCTGGACGCAGGGCTCTCCCAAGTTCCCTCCGAGCC GAATAAAAAGCGTCCGCCCGCAGCTCTCCGCCAAAGACGGACATTGACTCCAGGACTCCG CAGAATGGAGCAAGAATGAGAGGAAAAAGGCCGGCAGAAAAGCATGAACTGGAGGTTTGT TGAGCTCCTCTACTTCCTGTTTGTATGGGGCCGTATCTCAGTGCAGCCCTCCCACCAGGA ACCAGCTGGGACAGACCAACATGTCTCCAAGGAATTTGATTGGCTTATTTCAGACAGGGG GCCTTTCCACCACGCCAGGAGCTATCTATCCTTTGTGGAAAGACACCGTCAAGGATTTAC AACCAGATATAAAATATACAGGGAGTTTGCCCGTTGGAAGGTGAGGAACACAGCCATCGA GAGGAGAGACCTGGTCCGTCATCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAGACCGCGGCGCACTTGGACTTCCCTCTCCATTCGCTACCCGCCTCGCTCCCGGGCCC CACGGCTGCGAACTGATCTGGCGCGGGGGGAGGAGGAAAGCGCAGGCGAGCGACGAGCGA GAGAGGGAGAAGGCGAGCGAGCGAGAGAGCCGGAGAGAGAGCCAGAGAGCCGGGGGGCAG AGGGAGTAGTGACCGCCTTCCGGAGCCGGGATTCATGCCTGTCCTCGGGACCAGCGAAGG GGACTTTACGGCTGAGTATGAGCCAGGCTGCTAGGAGCCAGGTACCCCCACGCCTGCAGT CCCCGCGCCGTTCCCGGTATGCGAGCTGGACGCAGGGCTCTCCCAAGTTCCCTCCGAGCC GAATAAAAAGCGTCCGCCCGCAGCTCTCCGCCAAAGACGGACATTGACTCCAGGACTCCG CAGAATGGAGCAAGAATGAGAGGAAAAAGGCCGGCAGAAAAGCATGAACTGGAGGTTTGT TGAGCTCCTCTACTTCCTGTTTGTATGGGGCCGTATCTCAGTGCAGCCCTCCCACCAGGA ACCAGCTGGGACAGACCAACATGTCTCCAAGGAATTTGATTGGCTTATTTCAGACAGGGG GCCTTTCCACCACGCCAGGAGCTATCTATCCTTTGTGGAAAGACACCGTCAAGGATTTAC AACCAGATATAAAATATACAGGGAGTTTGCCCGTTGGAAGGTGAGGAACACAGCCATCGA GAGGAGAGACCTGGTCCGTCATCCAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-414, gnl|bosTau2|chr8 (60623868-60623464) | |
| 1-414, gnl|Hg17|chr9 (119211299-119210887) | |
| 1-414, gnl|Mm7|chr4 (68388099-68387711) | |
| 679-780, gnl|bosTau2|chr8 (60460977-60460876) | |
| 679-780, gnl|canFam2|chr11 (75720688-75720919) | |
| 679-780, gnl|danRer3|chr6 (19575492-19575284) | |
| 679-780, gnl|dasNov1|scaffold_83880 (3672-3441) | |
| 679-780, gnl|echTel1|scaffold_286032 (51205-50974) | |
| 679-780, gnl|fr1|chrUn (42401103-42401331) | |
| 679-780, gnl|galGal2|chr17 (6821309-6821085) | |
| 679-780, gnl|hg17|chr9 (119090773-119091004) | |
| 679-780, gnl|Hg17|chr9 (119090985-119090884) | |
| 679-780, gnl|loxAfr1|scaffold_19019 (4284-4053) | |
| 679-780, gnl|mm7|chr4 (68274896-68275127) | |
| 679-780, gnl|Mm7|chr4 (68275108-68275007) | |
| 679-780, gnl|monDom2|scaffold_38 (10941747-10941965) | |
| 679-780, gnl|oryCun1|scaffold_214326 (149974-150205) | |
| 679-780, gnl|panTro1|chr11 (103723808-103724039) | |
| 679-780, gnl|rheMac2|chr15 (16760903-16760672) | |
| 679-780, gnl|rn3|chr5 (86155964-86156195) | |
| 679-780, gnl|tetNig1|chr4 (4705779-4705581) | |
| 679-780, gnl|xenTro1|scaffold_156 (1195711-1195918) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-414, gnl|bosTau2|chr8 (60623868-60623464) | |
| 1-414, gnl|Hg17|chr9 (119211299-119210887) | |
| 1-414, gnl|Mm7|chr4 (68388099-68387711) | |
| 679-780, gnl|bosTau2|chr8 (60460977-60460876) | |
| 679-780, gnl|canFam2|chr11 (75720688-75720919) | |
| 679-780, gnl|danRer3|chr6 (19575492-19575284) | |
| 679-780, gnl|dasNov1|scaffold_83880 (3672-3441) | |
| 679-780, gnl|echTel1|scaffold_286032 (51205-50974) | |
| 679-780, gnl|fr1|chrUn (42401103-42401331) | |
| 679-780, gnl|galGal2|chr17 (6821309-6821085) | |
| 679-780, gnl|hg17|chr9 (119090773-119091004) | |
| 679-780, gnl|Hg17|chr9 (119090985-119090884) | |
| 679-780, gnl|loxAfr1|scaffold_19019 (4284-4053) | |
| 679-780, gnl|mm7|chr4 (68274896-68275127) | |
| 679-780, gnl|Mm7|chr4 (68275108-68275007) | |
| 679-780, gnl|monDom2|scaffold_38 (10941747-10941965) | |
| 679-780, gnl|oryCun1|scaffold_214326 (149974-150205) | |
| 679-780, gnl|panTro1|chr11 (103723808-103724039) | |
| 679-780, gnl|rheMac2|chr15 (16760903-16760672) | |
| 679-780, gnl|rn3|chr5 (86155964-86156195) | |
| 679-780, gnl|tetNig1|chr4 (4705779-4705581) | |
| 679-780, gnl|xenTro1|scaffold_156 (1195711-1195918) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) |