Ss1.1-rece40_c2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGCCGCTGGGGATGGAACTACTTGAACTTGGTCACAGAGGAGATGATCAACCCCTACA GAAACCTGCCCCTGGCCATCATCATCTCCCTGCCCATCGTCACCCTGGTGTACGTGCTCA CGAACCTGGCCTACTTCACCACGCTGTCCACGGAGCAGATGCTGACCTCGGAGGCCGTGG CCGTGGATTTCGGGAACTACCACCTGGGAGTCATGTCCTGGATCATCCCCGTCTTCGTGG GCCTGTCCTGCTTCGGCTCCGTCAACGGGTCCCTCTTCACGTCCTCCAGGCTGTTCTTCG TGGGGGCCAGGGAGGGCCACCTGCCGTCTGTCCTATCCATGATCCACCCGCGGCTCCTGA CGCCCGTGCCCTCCCTTGTATTCACGTGCGTGATGACCCTGCTGTACGCCTTCTCCAGAG ACATCTTCTCCGTCATCAACTTCTTCAGCTTCTTCAACTGGCTCTGCGTGGCCCTGGCCA TCATCGGAATGCTGTGGCTGCGCTACCGCAAGCCCGAGCTGGAGCGGCCATCAAGGTGAA CGTGGCCCTGCCCGTGTTCTTCATCCTGGCCTGCCTCTTCCTGATCGCCGTCTCCTTCTG GAAGACGCCCGTGGAGTGCGGCATCGGCTTCACCATCATCCTCAGCGGCCTGCCCGTCTA ACTTCCTCGGCGCTGGTGGAGCACAAGCCCAAGTGGCTGCTCCAGGGCATCTTTTCCACG ACGGTCCTTTGCCANAAGCTCATGCACGTGGTCCCCAGGAGAANAAGCNCAGGACCAAGG AGCCCCGAGGAG------------AATNACCCACCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGCCGCTGGGGATGGAACTACTTGAACTTGGTCACAGAGGAGATGATCAACCCCTACA GAAACCTGCCCCTGGCCATCATCATCTCCCTGCCCATCGTCACCCTGGTGTACGTGCTCA CGAACCTGGCCTACTTCACCACGCTGTCCACGGAGCAGATGCTGACCTCGGAGGCCGTGG CCGTGGATTTCGGGAACTACCACCTGGGAGTCATGTCCTGGATCATCCCCGTCTTCGTGG GCCTGTCCTGCTTCGGCTCCGTCAACGGGTCCCTCTTCACGTCCTCCAGGCTGTTCTTCG TGGGGGCCAGGGAGGGCCACCTGCCGTCTGTCCTATCCATGATCCACCCGCGGCTCCTGA CGCCCGTGCCCTCCCTTGTATTCACGTGCGTGATGACCCTGCTGTACGCCTTCTCCAGAG ACATCTTCTCCGTCATCAACTTCTTCAGCTTCTTCAACTGGCTCTGCGTGGCCCTGGCCA TCATCGGAATGCTGTGGCTGCGCTACCGCAAGCCCGAGCTGGAGCGGCCATCAAGGTGAA CGTGGCCCTGCCCGTGTTCTTCATCCTGGCCTGCCTCTTCCTGATCGCCGTCTCCTTCTG GAAGACGCCCGTGGAGTGCGGCATCGGCTTCACCATCATCCTCAGCGGCCTGCCCGTCTA ACTTCCTCGGCGCTGGTGGAGCACAAGCCCAAGTGGCTGCTCCAGGGCATCTTTTCCACG ACGGTCCTTTGCCANAAGCTCATGCACGTGGTCCCCAGGAGAANAAGCNCAGGACCAAGG AGCCCCGAGGAG------------AATNACCCACCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 59-186, gnl|bosTau2|chr18 (13690324-13690451) | |
| 59-186, gnl|canFam2|chr5 (68335631-68335466) | |
| 59-186, gnl|danRer3|chr25 (17318384-17318529) | |
| 59-186, gnl|dasNov1|scaffold_116219 (4883-4719) | |
| 59-186, gnl|echTel1|scaffold_307950 (429-280) | |
| 59-186, gnl|fr1|chrUn (272160803-272160949) | |
| 59-186, gnl|galGal2|chr11 (18301475-18301611) | |
| 59-186, gnl|hg17|chr16 (86430787-86430950) | |
| 59-186, gnl|Hg17|chr16 (86430935-86430808) | |
| 59-186, gnl|loxAfr1|scaffold_31494 (6020-5867) | |
| 59-186, gnl|mm7|chr8 (120528841-120529004) | |
| 59-186, gnl|Mm7|chr8 (120528989-120528862) | |
| 59-186, gnl|monDom2|scaffold_23 (10421562-10421408) | |
| 59-186, gnl|oryCun1|scaffold_76361 (855-1009) | |
| 59-186, gnl|panTro1|chr18 (81399362-81399525) | |
| 59-186, gnl|rheMac2|chr20 (85989918-85990081) | |
| 59-186, gnl|rn3|chr19 (52131413-52131575) | |
| 59-186, gnl|tetNig1|chrUn_random (18453995-18454125) | |
| 59-186, gnl|xenTro1|scaffold_455 (82339-82483) | |
| 534-712, gnl|bosTau2|chr18 (13693521-13693700) | |
| 534-712, gnl|Hg17|chr16 (86425700-86425521) | |
| 534-712, gnl|Mm7|chr8 (120525775-120525596) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 59-186, gnl|bosTau2|chr18 (13690324-13690451) | |
| 59-186, gnl|canFam2|chr5 (68335631-68335466) | |
| 59-186, gnl|danRer3|chr25 (17318384-17318529) | |
| 59-186, gnl|dasNov1|scaffold_116219 (4883-4719) | |
| 59-186, gnl|echTel1|scaffold_307950 (429-280) | |
| 59-186, gnl|fr1|chrUn (272160803-272160949) | |
| 59-186, gnl|galGal2|chr11 (18301475-18301611) | |
| 59-186, gnl|hg17|chr16 (86430787-86430950) | |
| 59-186, gnl|Hg17|chr16 (86430935-86430808) | |
| 59-186, gnl|loxAfr1|scaffold_31494 (6020-5867) | |
| 59-186, gnl|mm7|chr8 (120528841-120529004) | |
| 59-186, gnl|Mm7|chr8 (120528989-120528862) | |
| 59-186, gnl|monDom2|scaffold_23 (10421562-10421408) | |
| 59-186, gnl|oryCun1|scaffold_76361 (855-1009) | |
| 59-186, gnl|panTro1|chr18 (81399362-81399525) | |
| 59-186, gnl|rheMac2|chr20 (85989918-85990081) | |
| 59-186, gnl|rn3|chr19 (52131413-52131575) | |
| 59-186, gnl|tetNig1|chrUn_random (18453995-18454125) | |
| 59-186, gnl|xenTro1|scaffold_455 (82339-82483) | |
| 534-712, gnl|bosTau2|chr18 (13693521-13693700) | |
| 534-712, gnl|Hg17|chr16 (86425700-86425521) | |
| 534-712, gnl|Mm7|chr8 (120525775-120525596) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| clu (0.119646) |