Ss1.1-reep01c_o24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGACGTTTTCATCATGGACACTATCGGGGGCGGGGAGGTGAGCCTGGGGGACTTGGCAG ATCTCACCGTCACCAACGACAACGACCTCAGCTGCGATCTGTCTGACAGCAAAGATGCCT TCAAGAAGACCTGGAACCCCAAATTCACCCTCCGTTCACACTACGATGGCATCCGCTCCC TGGCTTTCCACCACAGCCAGTCAGCTTTGCTTACCGCCTCCGAGGACGGCACGCTCAAGC TCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCTGCGCTAGACGTGGAACCTA TCCACGCCTTCCGGGCTCACAGGGGGCCCGTGCTGGCGGTAGCCATGGGCAGCAGCAGCG AGCACTGTTACAGTGGCGGGGCAGATGCCCGCATCCACAGCTGGAAGATTCCAGACCTCA ACATGGACCCCTACGACGGTTACGACCCAAGTGTGTTGAGCCACGTCCTGGAGGGCCATG GGGACGCAGTGTGGGGCCTGGCCTTCAGTCCCGCCTCCCAGCGCCTGGCCTCCTGCTCTG CCGACGGCACGGTCCGCATCTGGGACCCCAGCAGCAGCAGCCCCGGCTGCCTCTGTACCT TTCCCACAGCCAGCGATCACGGGATCCCCACCTCAGTGGCCTTCACCAGCACCGAGCCGG CCCACATCGTGACCTCCTTCCGCTCTGGCGACACTGTCCTGTATGACCTGGAGGCTGGCA GTGCCCTCCTTACACTGGACTCCCGGGGGAGCAGCGGTAAGCGCCGCTTCTGTGGCTTTG GTGACCTGGTGCCCAGTCAGCAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGACGTTTTCATCATGGACACTATCGGGGGCGGGGAGGTGAGCCTGGGGGACTTGGCAG ATCTCACCGTCACCAACGACAACGACCTCAGCTGCGATCTGTCTGACAGCAAAGATGCCT TCAAGAAGACCTGGAACCCCAAATTCACCCTCCGTTCACACTACGATGGCATCCGCTCCC TGGCTTTCCACCACAGCCAGTCAGCTTTGCTTACCGCCTCCGAGGACGGCACGCTCAAGC TCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCTGCGCTAGACGTGGAACCTA TCCACGCCTTCCGGGCTCACAGGGGGCCCGTGCTGGCGGTAGCCATGGGCAGCAGCAGCG AGCACTGTTACAGTGGCGGGGCAGATGCCCGCATCCACAGCTGGAAGATTCCAGACCTCA ACATGGACCCCTACGACGGTTACGACCCAAGTGTGTTGAGCCACGTCCTGGAGGGCCATG GGGACGCAGTGTGGGGCCTGGCCTTCAGTCCCGCCTCCCAGCGCCTGGCCTCCTGCTCTG CCGACGGCACGGTCCGCATCTGGGACCCCAGCAGCAGCAGCCCCGGCTGCCTCTGTACCT TTCCCACAGCCAGCGATCACGGGATCCCCACCTCAGTGGCCTTCACCAGCACCGAGCCGG CCCACATCGTGACCTCCTTCCGCTCTGGCGACACTGTCCTGTATGACCTGGAGGCTGGCA GTGCCCTCCTTACACTGGACTCCCGGGGGAGCAGCGGTAAGCGCCGCTTCTGTGGCTTTG GTGACCTGGTGCCCAGTCAGCAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 99-275, gnl|bosTau2|chr18 (49722447-49722623) | |
| 99-275, gnl|canFam2|chr1 (112083924-112083733) | |
| 99-275, gnl|danRer3|chrUn (49983331-49983146) | |
| 99-275, gnl|dasNov1|scaffold_178520 (1960-2128) | |
| 99-275, gnl|echTel1|scaffold_301065 (7724-7913) | |
| 99-275, gnl|fr1|chrUn (79366833-79367022) | |
| 99-275, gnl|hg17|chr19 (51920571-51920763) | |
| 99-275, gnl|Hg17|chr19 (51920745-51920569) | |
| 99-275, gnl|loxAfr1|scaffold_24302 (17238-17432) | |
| 99-275, gnl|mm7|chr7 (14596789-14596599) | |
| 99-275, gnl|Mm7|chr7 (14596613-14596789) | |
| 99-275, gnl|monDom2|scaffold_149 (1822284-1822093) | |
| 99-275, gnl|oryCun1|scaffold_209535 (90467-90277) | |
| 99-275, gnl|panTro1|chr20 (49217089-49217281) | |
| 99-275, gnl|rheMac2|chr19 (53072727-53072919) | |
| 99-275, gnl|rn3|chr1 (77236552-77236362) | |
| 99-275, gnl|tetNig1|chr16 (1354259-1354449) | |
| 99-275, gnl|xenTro1|scaffold_271 (1219620-1219453) | |
| 428-623, gnl|bosTau2|chr18 (49724296-49724492) | |
| 428-623, gnl|Hg17|chr19 (51918399-51918203) | |
| 428-623, gnl|Mm7|chr7 (14601235-14601425) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 99-275, gnl|bosTau2|chr18 (49722447-49722623) | |
| 99-275, gnl|canFam2|chr1 (112083924-112083733) | |
| 99-275, gnl|danRer3|chrUn (49983331-49983146) | |
| 99-275, gnl|dasNov1|scaffold_178520 (1960-2128) | |
| 99-275, gnl|echTel1|scaffold_301065 (7724-7913) | |
| 99-275, gnl|fr1|chrUn (79366833-79367022) | |
| 99-275, gnl|hg17|chr19 (51920571-51920763) | |
| 99-275, gnl|Hg17|chr19 (51920745-51920569) | |
| 99-275, gnl|loxAfr1|scaffold_24302 (17238-17432) | |
| 99-275, gnl|mm7|chr7 (14596789-14596599) | |
| 99-275, gnl|Mm7|chr7 (14596613-14596789) | |
| 99-275, gnl|monDom2|scaffold_149 (1822284-1822093) | |
| 99-275, gnl|oryCun1|scaffold_209535 (90467-90277) | |
| 99-275, gnl|panTro1|chr20 (49217089-49217281) | |
| 99-275, gnl|rheMac2|chr19 (53072727-53072919) | |
| 99-275, gnl|rn3|chr1 (77236552-77236362) | |
| 99-275, gnl|tetNig1|chr16 (1354259-1354449) | |
| 99-275, gnl|xenTro1|scaffold_271 (1219620-1219453) | |
| 428-623, gnl|bosTau2|chr18 (49724296-49724492) | |
| 428-623, gnl|Hg17|chr19 (51918399-51918203) | |
| 428-623, gnl|Mm7|chr7 (14601235-14601425) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.245128) |