Ss1.1-reep02c_f14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGATTGTTGTCATCCTCATTAGAC------------------------------------ ------------------------------------ACTGAGCTGAATTTACCAGGAGGG GAAGTCATTAGAGAATTTCCTGGATCTCTCTGACCACAGGACAGCCTGAGAACATTGCCC ACACAGTCGAGGGAAGCCTGGCCCCGAGAGCCCAAGGGACAGGCTGGGACAGAGCACCTG TCTTGGGGTTCAGGGTTTCTGCCAAGAGCTGACCTTCGCTGTTTGATTTCTAGGGGCAAC TCCAAGTATCATTACTATGGGATCCGGCTGAAGCCAGACTCGCCCCTGAACCGGCTGCAG GAGGACACACAGTACATGGCCATGAGGCAGCAGCCAGTGCATCAGAAACCCAGGTGGGAG TTCCTGTCATGACGTGGTGGAAATGAATCCGACTGGGAACCATGAGGTTGTAGGTTCGAT CCCTGGGCTCGCTCCGTGGGTTAAGGATCTGGTGTTGCTGTGAGCTGTGATGTGTCCCAT GTCTTCCCTGAGTTCCCGGCGCCCGACCTGGGCAGTGTCCTGCTGCAGGAGAGCATCACA CTGCAGGACGTCAAGGCCCTGCAGCTGGCCTACCGGCGGCACTGCGAGGCAACTTTAGAC GTGGTGATGAACCTCCAGTTTCACTACATTGAGAAGCTGTGGCTTTCCTTCTGGAATTCT AAAGCCTCCTCAGGCGACGGCCCTGCCTCTTTACCAGCCAGTGACGAGGAGCCGGAAGGT GCCATCCTCCCGAAGGACAAGCTGGTGTCCCTGTGCAAATGTGACCCCGTCCTCAGGTGG ATGAGGACCTGCGACCACATCTTGTACCAGGCACTGGTGGAAATCCTCATCCCGGACGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGATTGTTGTCATCCTCATTAGAC------------------------------------ ------------------------------------ACTGAGCTGAATTTACCAGGAGGG GAAGTCATTAGAGAATTTCCTGGATCTCTCTGACCACAGGACAGCCTGAGAACATTGCCC ACACAGTCGAGGGAAGCCTGGCCCCGAGAGCCCAAGGGACAGGCTGGGACAGAGCACCTG TCTTGGGGTTCAGGGTTTCTGCCAAGAGCTGACCTTCGCTGTTTGATTTCTAGGGGCAAC TCCAAGTATCATTACTATGGGATCCGGCTGAAGCCAGACTCGCCCCTGAACCGGCTGCAG GAGGACACACAGTACATGGCCATGAGGCAGCAGCCAGTGCATCAGAAACCCAGGTGGGAG TTCCTGTCATGACGTGGTGGAAATGAATCCGACTGGGAACCATGAGGTTGTAGGTTCGAT CCCTGGGCTCGCTCCGTGGGTTAAGGATCTGGTGTTGCTGTGAGCTGTGATGTGTCCCAT GTCTTCCCTGAGTTCCCGGCGCCCGACCTGGGCAGTGTCCTGCTGCAGGAGAGCATCACA CTGCAGGACGTCAAGGCCCTGCAGCTGGCCTACCGGCGGCACTGCGAGGCAACTTTAGAC GTGGTGATGAACCTCCAGTTTCACTACATTGAGAAGCTGTGGCTTTCCTTCTGGAATTCT AAAGCCTCCTCAGGCGACGGCCCTGCCTCTTTACCAGCCAGTGACGAGGAGCCGGAAGGT GCCATCCTCCCGAAGGACAAGCTGGTGTCCCTGTGCAAATGTGACCCCGTCCTCAGGTGG ATGAGGACCTGCGACCACATCTTGTACCAGGCACTGGTGGAAATCCTCATCCCGGACGTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 14-346, gnl|bosTau2|chr7 (13112287-13112619) | |
| 457-582, gnl|bosTau2|chr7 (13115706-13115831) | |
| 457-582, gnl|canFam2|chr20 (57046377-57046242) | |
| 457-582, gnl|danRer3|chr8 (12212556-12212431) | |
| 457-582, gnl|echTel1|scaffold_244240 (9530-9667) | |
| 457-582, gnl|fr1|chrUn (229583577-229583446) | |
| 457-582, gnl|galGal2|chr28 (1872571-1872433) | |
| 457-582, gnl|hg17|chr19 (5959110-5959247) | |
| 457-582, gnl|Hg17|chr19 (5959236-5959111) | |
| 457-582, gnl|loxAfr1|scaffold_98415 (861-998) | |
| 457-582, gnl|mm7|chr17 (54995771-54995908) | |
| 457-582, gnl|Mm7|chr17 (54995897-54995772) | |
| 457-582, gnl|monDom2|scaffold_85 (3993851-3993988) | |
| 457-582, gnl|oryCun1|scaffold_156561 (5595-5730) | |
| 457-582, gnl|panTro1|chr20 (6306932-6307069) | |
| 457-582, gnl|rheMac2|chr19 (5912013-5912150) | |
| 457-582, gnl|rn3|chrUn (24998575-24998438) | |
| 457-582, gnl|tetNig1|chr1 (15346937-15346808) | |
| 457-582, gnl|xenTro1|scaffold_87 (1828617-1828484) | |
| 687-828, gnl|bosTau2|chr7 (13116486-13116627) | |
| 687-828, gnl|Hg17|chr19 (5958180-5958039) | |
| 687-828, gnl|Mm7|chr17 (54994894-54994753) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 14-346, gnl|bosTau2|chr7 (13112287-13112619) | |
| 457-582, gnl|bosTau2|chr7 (13115706-13115831) | |
| 457-582, gnl|canFam2|chr20 (57046377-57046242) | |
| 457-582, gnl|danRer3|chr8 (12212556-12212431) | |
| 457-582, gnl|echTel1|scaffold_244240 (9530-9667) | |
| 457-582, gnl|fr1|chrUn (229583577-229583446) | |
| 457-582, gnl|galGal2|chr28 (1872571-1872433) | |
| 457-582, gnl|hg17|chr19 (5959110-5959247) | |
| 457-582, gnl|Hg17|chr19 (5959236-5959111) | |
| 457-582, gnl|loxAfr1|scaffold_98415 (861-998) | |
| 457-582, gnl|mm7|chr17 (54995771-54995908) | |
| 457-582, gnl|Mm7|chr17 (54995897-54995772) | |
| 457-582, gnl|monDom2|scaffold_85 (3993851-3993988) | |
| 457-582, gnl|oryCun1|scaffold_156561 (5595-5730) | |
| 457-582, gnl|panTro1|chr20 (6306932-6307069) | |
| 457-582, gnl|rheMac2|chr19 (5912013-5912150) | |
| 457-582, gnl|rn3|chrUn (24998575-24998438) | |
| 457-582, gnl|tetNig1|chr1 (15346937-15346808) | |
| 457-582, gnl|xenTro1|scaffold_87 (1828617-1828484) | |
| 687-828, gnl|bosTau2|chr7 (13116486-13116627) | |
| 687-828, gnl|Hg17|chr19 (5958180-5958039) | |
| 687-828, gnl|Mm7|chr17 (54994894-54994753) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |