Non-Coding RNA Search

Ss1.1-reep02c_i4.5

Sequence:


               
               GATGGCGGCTGTGCTGAACGCAGAGCGACTGGAGGTCTCCGTCGACGGCCTCACGCTAAG
CCCGGACCCAGAGGAGCGGCCCGGCGCGGAGGGCGCGCCGCTGCTGCCGCCGCCGCTGCC
GCCGCCCTCGCCTCCCGGGTCCGACCGTGGCCGAGGCGCCGCAGGGGAGCAGCCAGAGCC
CGGGGAGGCGGCGGCTGGGGGCGCGGCGGAGGAGGCGCGGCGGCTGGAGCAGCGGTGGGG
CTTCGGCCTGGAGGAGCTGTACGGCCTGGCGCTGCGCTTCTTCAAAGAAAAAGATGGCAA
AGCCTTTCATCCAACTTACGAAGAAAAACTGAAGCTTGTGGCACTGCATAAGCAGGTTCT
TATGGGTCCATATAATCCAGATACTTGTCCTGAGGTTGGATTCTTTGATGTGTTGGGGAA
TGACAGGAGGAGAGAATGGGCAGCTCTGGGGACCATGTCTAAAGAGGATGCCATGGTAGA
GTTTGTCAAGCTCCTGAATAGGTGTTGTCATCTCTTTTCAACATATGTTGCATCCCACAA
AATAGAGAAGGAAGAGCAAGAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGGCGGCTGTGCTGAACGCAGAGCGACTGGAGGTCTCCGTCGACGGCCTCACGCTAAG
CCCGGACCCAGAGGAGCGGCCCGGCGCGGAGGGCGCGCCGCTGCTGCCGCCGCCGCTGCC
GCCGCCCTCGCCTCCCGGGTCCGACCGTGGCCGAGGCGCCGCAGGGGAGCAGCCAGAGCC
CGGGGAGGCGGCGGCTGGGGGCGCGGCGGAGGAGGCGCGGCGGCTGGAGCAGCGGTGGGG
CTTCGGCCTGGAGGAGCTGTACGGCCTGGCGCTGCGCTTCTTCAAAGAAAAAGATGGCAA
AGCCTTTCATCCAACTTACGAAGAAAAACTGAAGCTTGTGGCACTGCATAAGCAGGTTCT
TATGGGTCCATATAATCCAGATACTTGTCCTGAGGTTGGATTCTTTGATGTGTTGGGGAA
TGACAGGAGGAGAGAATGGGCAGCTCTGGGGACCATGTCTAAAGAGGATGCCATGGTAGA
GTTTGTCAAGCTCCTGAATAGGTGTTGTCATCTCTTTTCAACATATGTTGCATCCCACAA
AATAGAGAAGGAAGAGCAAGAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q7SYL2_BRARE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q7SYL2_BRARE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-287, gnl|bosTau2|chr16 (17596383-17596097)
               

               
               1-287, gnl|Hg17|chr1 (222681112-222680826)
               

               
               1-287, gnl|Mm7|chr1 (180705841-180706118)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-287, gnl|bosTau2|chr16 (17596383-17596097)
               

               
               1-287, gnl|Hg17|chr1 (222681112-222680826)
               

               
               1-287, gnl|Mm7|chr1 (180705841-180706118)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	1-287, gnl\|bosTau2\|chr16 (17596383-17596097)
	1-287, gnl\|Hg17\|chr1 (222681112-222680826)
	1-287, gnl\|Mm7\|chr1 (180705841-180706118)