Non-Coding RNA Search

Ss1.1-reep03c_p24.5

Sequence:


               
               TGGCTCTGGACTTGCGTCCTGGGGTGCTCGTCGCTCGACCCAGGAAGGCCGGGAGCAGGA
AGCCATCCGTGCCCCAGCCTCTCCTTTCGGGTTACACCCCCGGCCTCCAGTCTGGAGCCT
GTTTCCCTGGAATGCGGCGTGGGCTGAGGCTCTGCTGTCCTTCTGCAGGAGCTGAATGAG
CGCTGGCGGTCCCTGCAGCAGCTGGCCGAGGAGCGGAGCCAGCTCCTGGGCAGCGCCCAT
GAGGTGCAGAGGTTCCACAGAGACGCCGATGAAACCAAAGAGTGGATCGAGGAGAAGAAT
CAGGCTCTGAACACGGACAACTACGGCCACGACCTGGCCAGCGTCCAGGCCCTGCAGCGC
AAGCACGAGGGCTTCGAGAGGGACCTCGCTGCCCTGGGCGACAAGGTGAACTCCCTCGGG
GAGACGGCCGAGCGCCTGATCCAGTCCCACCCCGAGGCGGCCGAGGACCTGCAGGAGAAG
TGCACCGAGTTGAACCAGGCCTGGAGCAGCCTAGGCAAGCGCGCCGACCAGCGCAAGGCC
AAGCTGGGCGACTCCCACGACCTGCAGCGCTTCCTCAGCGACTTCCGGGACCTCATGTCT
TGGATCAGCGGAATCCGAGGGTTGGTGTCCTCGGACGAGCTCGCCAAGGATGTCACCGGA
GCCGAGGCCCTGCTGGAACGACACCAGGAGCACCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCTCTGGACTTGCGTCCTGGGGTGCTCGTCGCTCGACCCAGGAAGGCCGGGAGCAGGA
AGCCATCCGTGCCCCAGCCTCTCCTTTCGGGTTACACCCCCGGCCTCCAGTCTGGAGCCT
GTTTCCCTGGAATGCGGCGTGGGCTGAGGCTCTGCTGTCCTTCTGCAGGAGCTGAATGAG
CGCTGGCGGTCCCTGCAGCAGCTGGCCGAGGAGCGGAGCCAGCTCCTGGGCAGCGCCCAT
GAGGTGCAGAGGTTCCACAGAGACGCCGATGAAACCAAAGAGTGGATCGAGGAGAAGAAT
CAGGCTCTGAACACGGACAACTACGGCCACGACCTGGCCAGCGTCCAGGCCCTGCAGCGC
AAGCACGAGGGCTTCGAGAGGGACCTCGCTGCCCTGGGCGACAAGGTGAACTCCCTCGGG
GAGACGGCCGAGCGCCTGATCCAGTCCCACCCCGAGGCGGCCGAGGACCTGCAGGAGAAG
TGCACCGAGTTGAACCAGGCCTGGAGCAGCCTAGGCAAGCGCGCCGACCAGCGCAAGGCC
AAGCTGGGCGACTCCCACGACCTGCAGCGCTTCCTCAGCGACTTCCGGGACCTCATGTCT
TGGATCAGCGGAATCCGAGGGTTGGTGTCCTCGGACGAGCTCGCCAAGGATGTCACCGGA
GCCGAGGCCCTGCTGGAACGACACCAGGAGCACCGG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-260, gnl|bosTau2|chr11 (78427639-78427894)
               

               
               5-260, gnl|Mm7|chr2 (30014658-30014896)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-260, gnl|bosTau2|chr11 (78427639-78427894)
               

               
               5-260, gnl|Mm7|chr2 (30014658-30014896)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	5-260, gnl\|bosTau2\|chr11 (78427639-78427894)
	5-260, gnl\|Mm7\|chr2 (30014658-30014896)