Ss1.1-reep04c_o18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACCCCTGCCCTGAGTGTGGGAGCTTCTTCCGCTCCAAGTCCTACTTGAACAAACACATCC AGAAGGTGCACGTCCGGGCCCTTGGGGGCCCCCTGGGGGACCTGGGCCCCACCCTTGGCT CGCCCTTCTCTCCCCAGCAGAACATGTCTCTCCTTGAGTCCTTTGGGTTTCAGATCGTTC AATCAGCGTTTGCATCATCTCTGGTAGATCCCGAGGTTGACCAGCAGCCCATGGGGCCTG AGGGCAAGTGAGGCAGAGGCTTCGTCCCCATGGAAACGCCACTGGGGACAGCTGAGAAAT GCTGTGAATGCGGAGGAAGTGGTGTCTTTGGGTTCTGTAGCTGAGAGATTTTTATTCGTT TTTAACTCCCCCTCCAGCCCTGTCACCCCTCCCCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACCCCTGCCCTGAGTGTGGGAGCTTCTTCCGCTCCAAGTCCTACTTGAACAAACACATCC AGAAGGTGCACGTCCGGGCCCTTGGGGGCCCCCTGGGGGACCTGGGCCCCACCCTTGGCT CGCCCTTCTCTCCCCAGCAGAACATGTCTCTCCTTGAGTCCTTTGGGTTTCAGATCGTTC AATCAGCGTTTGCATCATCTCTGGTAGATCCCGAGGTTGACCAGCAGCCCATGGGGCCTG AGGGCAAGTGAGGCAGAGGCTTCGTCCCCATGGAAACGCCACTGGGGACAGCTGAGAAAT GCTGTGAATGCGGAGGAAGTGGTGTCTTTGGGTTCTGTAGCTGAGAGATTTTTATTCGTT TTTAACTCCCCCTCCAGCCCTGTCACCCCTCCCCTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 1-159, - strand, RNAz p=0.973069 | |
| 200-309, + strand, RNAz p=0.823528 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-159, - strand, RNAz p=0.973069 | |
| 200-309, + strand, RNAz p=0.823528 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_032052, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-394, gnl|bosTau2|chr17 (43604065-43603658) | |
| 1-394, gnl|Hg17|chr22 (30047681-30047277) | |
| 1-394, gnl|Mm7|chr11 (3259819-3260206) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-394, gnl|bosTau2|chr17 (43604065-43603658) | |
| 1-394, gnl|Hg17|chr22 (30047681-30047277) | |
| 1-394, gnl|Mm7|chr11 (3259819-3260206) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nlu (0.191681) | |
| nca (0.136874) | |
| eep (0.122564) | |
| cty (0.10408) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) | |
| nca (0.136874) | |
| eep (0.122564) | |
| cty (0.10408) |