Non-Coding RNA Search

Ss1.1-reep05c_o19.5

Sequence:


               
               CCGGAAGCCCTGGCAGTGGGAATGGGCAGGATTGACTGAGTGAGAAGGGCAGATGGACGA
GGGAGCCACGACTCAGCTTCCTGGAGCCATCCCGCCTCAGGCTGTGGAAATCAAGAGTGC
AGGCTGAGTCGTGGCTGCCAAGGCTGCCCCTCTGCCAGGGCTGGGCCAGGAAGGGCTGAT
GTTCCAGTGCTCTCAGCTCTCTGGGTGGTCCGGTGGGAGATGGAGGGGATGCCTTTGCTT
CTGACTATGACTTCGGTCCTGCCAAGGCCTGCTGTGAAGCAGGCCTAGGTTCTGACCTTT
GCCCTGGAGCTTTGGAATACACTTCCCTCTCAACCATTGGCGTTGCACTGTTTTTCCTGG
ACTGGGTTCAGCTATGCCCCCTGCTCTTCTCCCCGAATTTTCCTGTCTTTACAGTGTTGG
GCGCCCCAAGCACATGCGGGTGATGGCTGGAGCCCTGGAAGGGGACCTCTTCATCGGACC
AAAAGCAGAGGAGCACCGGGGGCTGCTGGCCATCCACTACCCCATGGAGCACGGAGTGGT
GCGGGACTGGAATGACATGGAGCGCATCTGGCAGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGAAGCCCTGGCAGTGGGAATGGGCAGGATTGACTGAGTGAGAAGGGCAGATGGACGA
GGGAGCCACGACTCAGCTTCCTGGAGCCATCCCGCCTCAGGCTGTGGAAATCAAGAGTGC
AGGCTGAGTCGTGGCTGCCAAGGCTGCCCCTCTGCCAGGGCTGGGCCAGGAAGGGCTGAT
GTTCCAGTGCTCTCAGCTCTCTGGGTGGTCCGGTGGGAGATGGAGGGGATGCCTTTGCTT
CTGACTATGACTTCGGTCCTGCCAAGGCCTGCTGTGAAGCAGGCCTAGGTTCTGACCTTT
GCCCTGGAGCTTTGGAATACACTTCCCTCTCAACCATTGGCGTTGCACTGTTTTTCCTGG
ACTGGGTTCAGCTATGCCCCCTGCTCTTCTCCCCGAATTTTCCTGTCTTTACAGTGTTGG
GCGCCCCAAGCACATGCGGGTGATGGCTGGAGCCCTGGAAGGGGACCTCTTCATCGGACC
AAAAGCAGAGGAGCACCGGGGGCTGCTGGCCATCCACTACCCCATGGAGCACGGAGTGGT
GCGGGACTGGAATGACATGGAGCGCATCTGGCAGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               333-491, gnl|bosTau2|chr11 (3294884-3295043)
               

               
               333-491, gnl|Hg17|chr2 (97735763-97735551)
               

               
               333-491, gnl|Mm7|chr1 (36948446-36948250)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               333-491, gnl|bosTau2|chr11 (3294884-3295043)
               

               
               333-491, gnl|Hg17|chr2 (97735763-97735551)
               

               
               333-491, gnl|Mm7|chr1 (36948446-36948250)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	333-491, gnl\|bosTau2\|chr11 (3294884-3295043)
	333-491, gnl\|Hg17\|chr2 (97735763-97735551)
	333-491, gnl\|Mm7\|chr1 (36948446-36948250)