Non-Coding RNA Search

Ss1.1-reep06c_m20.5

Sequence:


               
               GTTTTAAGTGGTGTGTGTGGGACTTCCTGTGAGGTAAGGATCTTGTGTAGAAGCATGTGT
TCCACCCTAGCCCAGCACAGTAGGTTAAAGGATCCAGCAGTGCCACAACTGTGGCTTGGA
TTTAATCCCTGGCGCAGGAATGTCCATACGCCACAGGTGCAGCCATTAAGAAAGAGAGAG
AGTTAGGGGACAGTGTTGAAGGCCTAACAGATTAGAAACCATGAATGTGTAATCCTTGGA
ATACGTAATCCATTGGAATAGTATCAATCCATATATTTCTGCTGTTTTCTCTAGCAACAC
CCAGCTGCCTGTACAAGAGCAGAGAACACTTACTATTGTGCAGTTCCTGGATCATGATTT
ATAGACAGATGAAGAGCACTGACAAGGGAACAAGAGGATTGAAGGTGCTAGTGAAAGGAA
ATTCAAGGAATCCACCCAATTATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTAAGTGGTGTGTGTGGGACTTCCTGTGAGGTAAGGATCTTGTGTAGAAGCATGTGT
TCCACCCTAGCCCAGCACAGTAGGTTAAAGGATCCAGCAGTGCCACAACTGTGGCTTGGA
TTTAATCCCTGGCGCAGGAATGTCCATACGCCACAGGTGCAGCCATTAAGAAAGAGAGAG
AGTTAGGGGACAGTGTTGAAGGCCTAACAGATTAGAAACCATGAATGTGTAATCCTTGGA
ATACGTAATCCATTGGAATAGTATCAATCCATATATTTCTGCTGTTTTCTCTAGCAACAC
CCAGCTGCCTGTACAAGAGCAGAGAACACTTACTATTGTGCAGTTCCTGGATCATGATTT
ATAGACAGATGAAGAGCACTGACAAGGGAACAAGAGGATTGAAGGTGCTAGTGAAAGGAA
ATTCAAGGAATCCACCCAATTATG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               250-417, gnl|bosTau2|chr3 (16929949-16930118)
               

               
               250-417, gnl|Hg17|chr1 (147400902-147400740)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               250-417, gnl|bosTau2|chr3 (16929949-16930118)
               

               
               250-417, gnl|Hg17|chr1 (147400902-147400740)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eep (0.122564)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)
               

               
               cty (0.10408)

	250-417, gnl\|bosTau2\|chr3 (16929949-16930118)
	250-417, gnl\|Hg17\|chr1 (147400902-147400740)