Ss1.1-reep13c_o1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGCCCTGCTGGCTCCCTGTGCTGGGCGAAGTCCGTAGTTCCTGGTCATTCGCCGGTGT CCCCGGGGCCCAGCGACTGTGGATGGCAGAAGCCCAGAGTGGGACTGGCCAGCTGCAGGA GCAGAAAAAAGGTCTCCTGATAGGTGTCAGTGCTTCAGTGGATAAAATCATCTCGCACTT TGGGGCCGCCCGGAACTTGGTTCAGAAGGCCCAGTTGGGGGACAGCCGTCTGAGCCCAGA TGTGGGGCACCTGGTGCTGACTACCCTCTGTCCAGCTCTCCATGCCCTGGTGGCCGATGG GCTGAAGCCTTTCCAGAAGGACCTCATCACTGGGCAGCGTAGGAGCAGCCCCTGGAGCGT GGTGGAGGCCTCTGTGAAGCCAGCCTCTAGCACCCGTTCCCTGGGGACACTGTACAGCCA GGTCAGCCGCCTGGCCCCGCTGAGAAGCAGCCGGAGCCGCTTCCACGCCTTCATCCTGGG CCTCCTCAACACGAAGCAGCTGGAGGTGTGGTTTTCCAGTCTCCAGGAAGATGCAGGCCT GCTGTCCCTCCTGTACCTGCCCACCGGATTCTTCTCCCTGGCCCGGAGTGGCTGCCCCTC CTTATCCACAGAGCTGCTGCTCCTGCTGCAGCCACTGTCGGTGCTCACCTTCCACCTGGA TCTGCTCTTTGAGCACCATCACCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGCCCTGCTGGCTCCCTGTGCTGGGCGAAGTCCGTAGTTCCTGGTCATTCGCCGGTGT CCCCGGGGCCCAGCGACTGTGGATGGCAGAAGCCCAGAGTGGGACTGGCCAGCTGCAGGA GCAGAAAAAAGGTCTCCTGATAGGTGTCAGTGCTTCAGTGGATAAAATCATCTCGCACTT TGGGGCCGCCCGGAACTTGGTTCAGAAGGCCCAGTTGGGGGACAGCCGTCTGAGCCCAGA TGTGGGGCACCTGGTGCTGACTACCCTCTGTCCAGCTCTCCATGCCCTGGTGGCCGATGG GCTGAAGCCTTTCCAGAAGGACCTCATCACTGGGCAGCGTAGGAGCAGCCCCTGGAGCGT GGTGGAGGCCTCTGTGAAGCCAGCCTCTAGCACCCGTTCCCTGGGGACACTGTACAGCCA GGTCAGCCGCCTGGCCCCGCTGAGAAGCAGCCGGAGCCGCTTCCACGCCTTCATCCTGGG CCTCCTCAACACGAAGCAGCTGGAGGTGTGGTTTTCCAGTCTCCAGGAAGATGCAGGCCT GCTGTCCCTCCTGTACCTGCCCACCGGATTCTTCTCCCTGGCCCGGAGTGGCTGCCCCTC CTTATCCACAGAGCTGCTGCTCCTGCTGCAGCCACTGTCGGTGCTCACCTTCCACCTGGA TCTGCTCTTTGAGCACCATCACCA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 566-684, - strand, RNAz p=0.96183 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 566-684, - strand, RNAz p=0.96183 |
| Aligned organism(s): 9 entry(ies) | More info |
| Aligned organism(s): 9 entry(ies) | Help | Less info |
| 31-133, gnl|bosTau2|chr3 (9607516-9607618) | |
| 31-133, gnl|Hg17|chr1 (152107707-152107809) | |
| 31-133, gnl|Mm7|chr3 (89203570-89203468) | |
| 207-383, gnl|bosTau2|chr3 (9607968-9608144) | |
| 207-383, gnl|Hg17|chr1 (152108178-152108354) | |
| 207-383, gnl|Mm7|chr3 (89203154-89202978) | |
| 534-684, gnl|bosTau2|chr3 (9609725-9609875) | |
| 534-684, gnl|Hg17|chr1 (152109441-152109591) | |
| 534-684, gnl|Mm7|chr3 (89202072-89201922) |
| Aligned organism(s): 9 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 31-133, gnl|bosTau2|chr3 (9607516-9607618) | |
| 31-133, gnl|Hg17|chr1 (152107707-152107809) | |
| 31-133, gnl|Mm7|chr3 (89203570-89203468) | |
| 207-383, gnl|bosTau2|chr3 (9607968-9608144) | |
| 207-383, gnl|Hg17|chr1 (152108178-152108354) | |
| 207-383, gnl|Mm7|chr3 (89203154-89202978) | |
| 534-684, gnl|bosTau2|chr3 (9609725-9609875) | |
| 534-684, gnl|Hg17|chr1 (152109441-152109591) | |
| 534-684, gnl|Mm7|chr3 (89202072-89201922) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |