Non-Coding RNA Search

Ss1.1-reep14c_a7.5

Sequence:


               
               AGCCGCCGTACTCCTATGCCCAGCTGATCGTGCAGGCCATCTCCTCGTGCGCAGGACCGG
CAGCTAACACTAAGCGGCATCTACGCCCACATCACCAAGCATTACCCCTACTACAGGACG
GCCGACAAGGGCTGGCAGAATTCCATCCGCCACAACCTCTCCTTGAACCGCTACTTCATT
AAGGTCCCTCGTTCCCAGGAGGAGCCCGGGAAGGGGTCCTTTTGGCGGATAGACCCTGCC
TCCGAGGCCAAGCTCGTGGAGCAGGCGTTCCGGAAACGGAGGCAGCGGGGCACCTGCTTC
CGCACCCCCTTTGGGCCGCTGTCATCCAGGAGCGCTCCGGCCTCACCCACTCACCCGGGG
CTGATGTCGCCTCGTTCCAGTGGCCTGCAGACCCCAGAGTGCCTGTCGCGGGAGGGCTCG
CCCATCCCGCACGACCCCGACTTCGGGTCCAAGTTGGCGTCTGTTCCTGAGTACCGGTAC
TCCCAAAGTGCGCCTGGCTCTCCCGTCAGCGCGCAGCCGGTGATCATGGCCGTGCCACCC
CGACCGCCCAGCCTGGTGGCCAAGCCCGTGGCCTACATGCCAGCTTCCATCGTGACGGCC
CAGCAGCCGGCGGGCCACGCGATCCACGTGGTGCAGCAGGCCCCCCCTGTCACCATGCTC
AGAGTGGTCACCACCTCCGCCAGCTCCGCTAACGGATACATCCTGGCCAGCCAGGCCTCG
GCAGGGGCCACCCACGAAGCAGCGGGCACGGCCGTGCTGGACCTGGGCAGTGAGGCGAGA
GGCTTGGAAGAGAAACCCACCATAGCATTTGCCACCATCCCCGCTGCCAGCCGAGTGATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCCGCCGTACTCCTATGCCCAGCTGATCGTGCAGGCCATCTCCTCGTGCGCAGGACCGG
CAGCTAACACTAAGCGGCATCTACGCCCACATCACCAAGCATTACCCCTACTACAGGACG
GCCGACAAGGGCTGGCAGAATTCCATCCGCCACAACCTCTCCTTGAACCGCTACTTCATT
AAGGTCCCTCGTTCCCAGGAGGAGCCCGGGAAGGGGTCCTTTTGGCGGATAGACCCTGCC
TCCGAGGCCAAGCTCGTGGAGCAGGCGTTCCGGAAACGGAGGCAGCGGGGCACCTGCTTC
CGCACCCCCTTTGGGCCGCTGTCATCCAGGAGCGCTCCGGCCTCACCCACTCACCCGGGG
CTGATGTCGCCTCGTTCCAGTGGCCTGCAGACCCCAGAGTGCCTGTCGCGGGAGGGCTCG
CCCATCCCGCACGACCCCGACTTCGGGTCCAAGTTGGCGTCTGTTCCTGAGTACCGGTAC
TCCCAAAGTGCGCCTGGCTCTCCCGTCAGCGCGCAGCCGGTGATCATGGCCGTGCCACCC
CGACCGCCCAGCCTGGTGGCCAAGCCCGTGGCCTACATGCCAGCTTCCATCGTGACGGCC
CAGCAGCCGGCGGGCCACGCGATCCACGTGGTGCAGCAGGCCCCCCCTGTCACCATGCTC
AGAGTGGTCACCACCTCCGCCAGCTCCGCTAACGGATACATCCTGGCCAGCCAGGCCTCG
GCAGGGGCCACCCACGAAGCAGCGGGCACGGCCGTGCTGGACCTGGGCAGTGAGGCGAGA
GGCTTGGAAGAGAAACCCACCATAGCATTTGCCACCATCCCCGCTGCCAGCCGAGTGATC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9DGG2_CHICK

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9DGG2_CHICK

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               496-782, gnl|bosTau2|chr25 (37482429-37482143)
               

               
               496-782, gnl|Hg17|chr7 (4572182-4572468)
               

               
               496-782, gnl|Mm7|chr5 (141431458-141431744)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               496-782, gnl|bosTau2|chr25 (37482429-37482143)
               

               
               496-782, gnl|Hg17|chr7 (4572182-4572468)
               

               
               496-782, gnl|Mm7|chr5 (141431458-141431744)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.245128)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.245128)

	496-782, gnl\|bosTau2\|chr25 (37482429-37482143)
	496-782, gnl\|Hg17\|chr7 (4572182-4572468)
	496-782, gnl\|Mm7\|chr5 (141431458-141431744)