Ss1.1-reep16c_k4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGCGCGACCCTCAGCCAGCCATGTCGTCCCCGGCGTCCACCCCAAGCCGTCGCAGCACT CGGCGGGCCGCCCCTACGCAGCCAGGCCAGGACCCCCCGTCAGCTGGAGAACCTCAGCTG CTGCCCTTGTCGCCAGGCATCGAGCTCCGCAGCTCGCCCCGTGCGCCGTCGGCAGGGGCC CCCCTGGACCTGGACATGAGCTCGCCGCTGACCTACGGCACCCCAAGCTCAAGAGTGGAG GGCACCCCAAGGAGTGGCGTTCGTGGTACACCGGTGCGGCAGAGGCCCGACCTGGGGTCG GCGCGCAAGGGGCTGCAGGTGGACTTGCACTCGGACGGGCCGGCCGCAGAGGATATAGTG GCAAGCGAGCAGTCTTTGGGCCAGAAGCTCGTGATTTGGGGAACAGATGTAAATGTGGCA ACGTGCAAAGAAAATTTTCAGAGATTTATTCAGCGTTTTATCGATCCTCTGGCTAAAGAA GAAGAAAATGTTGGCATAGACATTACTGAACCTCTGTACATGCAGCGACTTGGGGAGATT AACATTACTGGAGAGCCATTTTTGAACGTAAACTGTGAACACATAAAATCATTTGACACA AATCTGTACAGACAGCTCATCTGCTACCCACAGGAAGTTATCCCAACTTTCGACATGGCT GTCAATGAGATCTTCTTTGACCGTTATCCTGACTCGATCTTAGAACATCAGATTCAAGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGCGCGACCCTCAGCCAGCCATGTCGTCCCCGGCGTCCACCCCAAGCCGTCGCAGCACT CGGCGGGCCGCCCCTACGCAGCCAGGCCAGGACCCCCCGTCAGCTGGAGAACCTCAGCTG CTGCCCTTGTCGCCAGGCATCGAGCTCCGCAGCTCGCCCCGTGCGCCGTCGGCAGGGGCC CCCCTGGACCTGGACATGAGCTCGCCGCTGACCTACGGCACCCCAAGCTCAAGAGTGGAG GGCACCCCAAGGAGTGGCGTTCGTGGTACACCGGTGCGGCAGAGGCCCGACCTGGGGTCG GCGCGCAAGGGGCTGCAGGTGGACTTGCACTCGGACGGGCCGGCCGCAGAGGATATAGTG GCAAGCGAGCAGTCTTTGGGCCAGAAGCTCGTGATTTGGGGAACAGATGTAAATGTGGCA ACGTGCAAAGAAAATTTTCAGAGATTTATTCAGCGTTTTATCGATCCTCTGGCTAAAGAA GAAGAAAATGTTGGCATAGACATTACTGAACCTCTGTACATGCAGCGACTTGGGGAGATT AACATTACTGGAGAGCCATTTTTGAACGTAAACTGTGAACACATAAAATCATTTGACACA AATCTGTACAGACAGCTCATCTGCTACCCACAGGAAGTTATCCCAACTTTCGACATGGCT GTCAATGAGATCTTCTTTGACCGTTATCCTGACTCGATCTTAGAACATCAGATTCAAGTA |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 125-720, gnl|bosTau2|chr6 (13649168-13648595) | |
| 125-720, gnl|Hg17|chr8 (49036741-49039773) | |
| 125-720, gnl|Mm7|chr17 (36014971-36014374) | |
| 173-339, gnl|bosTau2|chr14 (9838541-9838375) | |
| 173-339, gnl|canFam2|chr29 (3247737-3247938) | |
| 173-339, gnl|danRer3|chrNA (27733921-27733751) | |
| 173-339, gnl|dasNov1|scaffold_48622 (1217-1016) | |
| 173-339, gnl|echTel1|scaffold_276432 (50323-50120) | |
| 173-339, gnl|fr1|chrUn (61348340-61348536) | |
| 173-339, gnl|galGal2|chrUn (247973-248178) | |
| 173-339, gnl|hg17|chr8 (49037165-49037361) | |
| 173-339, gnl|Hg17|chr8 (49037164-49037329) | |
| 173-339, gnl|loxAfr1|scaffold_3886 (73256-73455) | |
| 173-339, gnl|mm7|chr16 (15175991-15175792) | |
| 173-339, gnl|Mm7|chr16 (15175990-15175825) | |
| 173-339, gnl|monDom2|scaffold_4 (118741174-118740973) | |
| 173-339, gnl|oryCun1|scaffold_195741 (9212-9414) | |
| 173-339, gnl|panTro1|chr7 (50599878-50600074) | |
| 173-339, gnl|rheMac2|chr8 (50486832-50487028) | |
| 173-339, gnl|rn3|chr11 (87211398-87211598) | |
| 173-339, gnl|tetNig1|chr15_random (637573-637762) | |
| 173-339, gnl|xenTro1|scaffold_8 (306529-306741) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 125-720, gnl|bosTau2|chr6 (13649168-13648595) | |
| 125-720, gnl|Hg17|chr8 (49036741-49039773) | |
| 125-720, gnl|Mm7|chr17 (36014971-36014374) | |
| 173-339, gnl|bosTau2|chr14 (9838541-9838375) | |
| 173-339, gnl|canFam2|chr29 (3247737-3247938) | |
| 173-339, gnl|danRer3|chrNA (27733921-27733751) | |
| 173-339, gnl|dasNov1|scaffold_48622 (1217-1016) | |
| 173-339, gnl|echTel1|scaffold_276432 (50323-50120) | |
| 173-339, gnl|fr1|chrUn (61348340-61348536) | |
| 173-339, gnl|galGal2|chrUn (247973-248178) | |
| 173-339, gnl|hg17|chr8 (49037165-49037361) | |
| 173-339, gnl|Hg17|chr8 (49037164-49037329) | |
| 173-339, gnl|loxAfr1|scaffold_3886 (73256-73455) | |
| 173-339, gnl|mm7|chr16 (15175991-15175792) | |
| 173-339, gnl|Mm7|chr16 (15175990-15175825) | |
| 173-339, gnl|monDom2|scaffold_4 (118741174-118740973) | |
| 173-339, gnl|oryCun1|scaffold_195741 (9212-9414) | |
| 173-339, gnl|panTro1|chr7 (50599878-50600074) | |
| 173-339, gnl|rheMac2|chr8 (50486832-50487028) | |
| 173-339, gnl|rn3|chr11 (87211398-87211598) | |
| 173-339, gnl|tetNig1|chr15_random (637573-637762) | |
| 173-339, gnl|xenTro1|scaffold_8 (306529-306741) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) | |
| eep (0.122564) |