Ss1.1-reep17c_g21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCACTCCGGCAGGTAGGGACCGGCCTCGCTCCCCTCAGCCGACGGGGGTGGGGTGGTTC TCCTTCCTCTGTGAGCCGCCTCCCCAAACCGCCCCCATCAGAGATACCGAGAGCCTAGAG GACCTGTCCCCCGCGCCAGAATCAGAGCCGCGACGCAAGACAGAGACCCTCTCCTGCTCG CCTCCTGAAGGGGTCCTCTTTGGCCAAGATGCCTTTGGGACTCTCTGCTGGGAGCACCCG CTCCGAAGATGGAAGCGAGGCCTTCTTGGAGGGAATGGTGGATTGGGAGCTGAGCAGACT GCAGCGGCAATGCAAAGTGATGGAGGGTGAAAGGCGAGCCTACAGCAAGGAAGTCCACCA GCGCATCAACAAGCAACTCGGGGAAATCCAGCGCCTGGAGGGGGTGCGGGACAAGTTGCA GGTGCAGATCAGCATTGCCCAGAGCCAGGTCAAGCGGCTGCGGGACAGCGAGAGGCTGGA GAACATGGGTCACCTGCTCAAGTGCCGGGTCCAAGTGCAGGCTGAGGTCAAGGAGCTGCA AGAGCAGACCAGAGCCCTGGACAGGGAGATCCAGGAGTGGGAGACCCGGATCTTTGCCCA CAGTCAGGACGTCAAGGCTCCAGGATGTGTCCTGAGTCAGAAGGTCAAAGTCCGGCAAAG GATCAAAATTCTAGAAGACCAGTTGGACAGGGTCACCTGTCGCTTTGACATCCAGCTGGT CCGAAATGCGACCTTGCGGGAGGAGCTGGATCTCCTGCGGATTGAGAGGAACCGCTATCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCACTCCGGCAGGTAGGGACCGGCCTCGCTCCCCTCAGCCGACGGGGGTGGGGTGGTTC TCCTTCCTCTGTGAGCCGCCTCCCCAAACCGCCCCCATCAGAGATACCGAGAGCCTAGAG GACCTGTCCCCCGCGCCAGAATCAGAGCCGCGACGCAAGACAGAGACCCTCTCCTGCTCG CCTCCTGAAGGGGTCCTCTTTGGCCAAGATGCCTTTGGGACTCTCTGCTGGGAGCACCCG CTCCGAAGATGGAAGCGAGGCCTTCTTGGAGGGAATGGTGGATTGGGAGCTGAGCAGACT GCAGCGGCAATGCAAAGTGATGGAGGGTGAAAGGCGAGCCTACAGCAAGGAAGTCCACCA GCGCATCAACAAGCAACTCGGGGAAATCCAGCGCCTGGAGGGGGTGCGGGACAAGTTGCA GGTGCAGATCAGCATTGCCCAGAGCCAGGTCAAGCGGCTGCGGGACAGCGAGAGGCTGGA GAACATGGGTCACCTGCTCAAGTGCCGGGTCCAAGTGCAGGCTGAGGTCAAGGAGCTGCA AGAGCAGACCAGAGCCCTGGACAGGGAGATCCAGGAGTGGGAGACCCGGATCTTTGCCCA CAGTCAGGACGTCAAGGCTCCAGGATGTGTCCTGAGTCAGAAGGTCAAAGTCCGGCAAAG GATCAAAATTCTAGAAGACCAGTTGGACAGGGTCACCTGTCGCTTTGACATCCAGCTGGT CCGAAATGCGACCTTGCGGGAGGAGCTGGATCTCCTGCGGATTGAGAGGAACCGCTATCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 2-164, gnl|bosTau2|chr18 (50460012-50460167) | |
| 2-164, gnl|canFam2|chr1 (110796862-110796203) | |
| 2-164, gnl|dasNov1|scaffold_49299 (7505-7060) | |
| 2-164, gnl|hg17|chr19 (53515176-53515843) | |
| 2-164, gnl|Hg17|chr19 (53515835-53515659) | |
| 2-164, gnl|loxAfr1|scaffold_93467 (662-188) | |
| 2-164, gnl|mm7|chr7 (42100999-42100483) | |
| 2-164, gnl|oryCun1|scaffold_86736 (11694-11185) | |
| 2-164, gnl|panTro1|chr20_random (23945850-23945190) | |
| 2-164, gnl|rheMac2|chr19 (54610513-54611179) | |
| 2-164, gnl|rn3|chr1 (96474585-96474076) | |
| 278-378, gnl|bosTau2|chr18 (50461668-50461768) | |
| 278-378, gnl|canFam2|chr1 (110798296-110797985) | |
| 278-378, gnl|dasNov1|scaffold_49299 (8510-8193) | |
| 278-378, gnl|echTel1|scaffold_264753 (10233-10534) | |
| 278-378, gnl|hg17|chr19 (53513728-53514037) | |
| 278-378, gnl|Hg17|chr19 (53513882-53513782) | |
| 278-378, gnl|mm7|chr7 (42104947-42104624) | |
| 278-378, gnl|Mm7|chr7 (42104757-42104857) | |
| 278-378, gnl|oryCun1|scaffold_86736 (12602-12309) | |
| 278-378, gnl|panTro1|chr20_random (23947303-23946995) | |
| 278-378, gnl|rheMac2|chr19 (54609070-54609379) | |
| 278-378, gnl|rn3|chr1 (96478344-96478021) | |
| 382-568, gnl|bosTau2|chr18 (50461928-50462114) | |
| 382-568, gnl|Hg17|chr19 (53513642-53513456) | |
| 382-568, gnl|Mm7|chr7 (42105304-42105490) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-164, gnl|bosTau2|chr18 (50460012-50460167) | |
| 2-164, gnl|canFam2|chr1 (110796862-110796203) | |
| 2-164, gnl|dasNov1|scaffold_49299 (7505-7060) | |
| 2-164, gnl|hg17|chr19 (53515176-53515843) | |
| 2-164, gnl|Hg17|chr19 (53515835-53515659) | |
| 2-164, gnl|loxAfr1|scaffold_93467 (662-188) | |
| 2-164, gnl|mm7|chr7 (42100999-42100483) | |
| 2-164, gnl|oryCun1|scaffold_86736 (11694-11185) | |
| 2-164, gnl|panTro1|chr20_random (23945850-23945190) | |
| 2-164, gnl|rheMac2|chr19 (54610513-54611179) | |
| 2-164, gnl|rn3|chr1 (96474585-96474076) | |
| 278-378, gnl|bosTau2|chr18 (50461668-50461768) | |
| 278-378, gnl|canFam2|chr1 (110798296-110797985) | |
| 278-378, gnl|dasNov1|scaffold_49299 (8510-8193) | |
| 278-378, gnl|echTel1|scaffold_264753 (10233-10534) | |
| 278-378, gnl|hg17|chr19 (53513728-53514037) | |
| 278-378, gnl|Hg17|chr19 (53513882-53513782) | |
| 278-378, gnl|mm7|chr7 (42104947-42104624) | |
| 278-378, gnl|Mm7|chr7 (42104757-42104857) | |
| 278-378, gnl|oryCun1|scaffold_86736 (12602-12309) | |
| 278-378, gnl|panTro1|chr20_random (23947303-23946995) | |
| 278-378, gnl|rheMac2|chr19 (54609070-54609379) | |
| 278-378, gnl|rn3|chr1 (96478344-96478021) | |
| 382-568, gnl|bosTau2|chr18 (50461928-50462114) | |
| 382-568, gnl|Hg17|chr19 (53513642-53513456) | |
| 382-568, gnl|Mm7|chr7 (42105304-42105490) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |