Ss1.1-reep17c_j17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAGAAGATGTCGCCGACGCCGCCGCTTTTCAGTTTCCCGAAGCGCGGACGCGGTTTACG AAATCTACCAGAGACGCCCTAAACAACAAAAATATCAAGCCATTGCTGAATACCTTCAGC CAGTTACCTGGCAGTGAAAATGAAAAAAAATGTACCCTTGACCAAGCTTTTAGAGGTGTT CTAGAAGAAGAAATTATAAATCATTCATCATGTGAAAATGTTTTAGCTATTATTTCTCTT GCTATTGGGGGAGTAACTGAAGGTATTTGTACCGCATCTACACCTTTTGTATTGTTGGGA GATGTTTTGGATTGTCTTCCTTTGGATCAGTGTGACACAATATTCACTTTTGTGGAAAAA AATGTTGCTACTTGGAAATCAAATACATTCTATTCTGCTGGGAAAAATTATTTACTACGT ATGTGTAATGATCTCCTACGAAGATTATCAAAATCCCAGAATACAGTTTTCTGTGGACGA ATTCAACTGTTTTTGGCCAGGCTTTTCCCTTTATCTGAGAAGTCAGGTCTTAACTTGCAG AGTCAGTTTAATCTGGAAAATGTCACTGTTTTCAATACCAACGAGCAGGAAAGCACATTG GGTCAGAAGCACACTGAGGATAGAGAAGAAGGAATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAGAAGATGTCGCCGACGCCGCCGCTTTTCAGTTTCCCGAAGCGCGGACGCGGTTTACG AAATCTACCAGAGACGCCCTAAACAACAAAAATATCAAGCCATTGCTGAATACCTTCAGC CAGTTACCTGGCAGTGAAAATGAAAAAAAATGTACCCTTGACCAAGCTTTTAGAGGTGTT CTAGAAGAAGAAATTATAAATCATTCATCATGTGAAAATGTTTTAGCTATTATTTCTCTT GCTATTGGGGGAGTAACTGAAGGTATTTGTACCGCATCTACACCTTTTGTATTGTTGGGA GATGTTTTGGATTGTCTTCCTTTGGATCAGTGTGACACAATATTCACTTTTGTGGAAAAA AATGTTGCTACTTGGAAATCAAATACATTCTATTCTGCTGGGAAAAATTATTTACTACGT ATGTGTAATGATCTCCTACGAAGATTATCAAAATCCCAGAATACAGTTTTCTGTGGACGA ATTCAACTGTTTTTGGCCAGGCTTTTCCCTTTATCTGAGAAGTCAGGTCTTAACTTGCAG AGTCAGTTTAATCTGGAAAATGTCACTGTTTTCAATACCAACGAGCAGGAAAGCACATTG GGTCAGAAGCACACTGAGGATAGAGAAGAAGGAATG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 258-381, gnl|bosTau2|chr24 (25612009-25611886) | |
| 258-381, gnl|canFam2|chr7 (70169678-70169833) | |
| 258-381, gnl|danRer3|chrNA (178475938-178476089) | |
| 258-381, gnl|dasNov1|scaffold_1560 (84998-84880) | |
| 258-381, gnl|echTel1|scaffold_296173 (19985-20140) | |
| 258-381, gnl|fr1|chrUn (196710341-196710203) | |
| 258-381, gnl|hg17|chr18 (250181-250336) | |
| 258-381, gnl|Hg17|chr18 (250309-250186) | |
| 258-381, gnl|loxAfr1|scaffold_1555 (1680-1834) | |
| 258-381, gnl|mm7|chr18 (10169048-10168901) | |
| 258-381, gnl|Mm7|chr18 (10168918-10169041) | |
| 258-381, gnl|monDom2|scaffold_21 (35370268-35370111) | |
| 258-381, gnl|oryCun1|scaffold_212922 (15876-16000) | |
| 258-381, gnl|panTro1|chr17 (12556996-12556841) | |
| 258-381, gnl|rheMac2|chr18 (13813454-13813299) | |
| 258-381, gnl|rn3|chr18 (1262650-1262503) | |
| 258-381, gnl|tetNig1|chr15_random (1294842-1294708) | |
| 258-381, gnl|xenTro1|scaffold_549 (675711-675841) | |
| 394-528, gnl|bosTau2|chr24 (25611024-25610892) | |
| 394-528, gnl|canFam2|chr7 (70168683-70168782) | |
| 394-528, gnl|danRer3|chrNA (178474216-178474314) | |
| 394-528, gnl|dasNov1|scaffold_1560 (85142-85048) | |
| 394-528, gnl|echTel1|scaffold_313706 (1017-1115) | |
| 394-528, gnl|fr1|chrUn (196710645-196710546) | |
| 394-528, gnl|galGal2|chr2 (101338521-101338422) | |
| 394-528, gnl|hg17|chr18 (249178-249277) | |
| 394-528, gnl|Hg17|chr18 (249310-249178) | |
| 394-528, gnl|loxAfr1|scaffold_1555 (715-814) | |
| 394-528, gnl|mm7|chr18 (10170472-10170373) | |
| 394-528, gnl|Mm7|chr18 (10170340-10170470) | |
| 394-528, gnl|monDom2|scaffold_21 (35371913-35371814) | |
| 394-528, gnl|oryCun1|scaffold_178278 (51059-51158) | |
| 394-528, gnl|panTro1|chr17 (12557999-12557900) | |
| 394-528, gnl|rheMac2|chr18 (13814456-13814357) | |
| 394-528, gnl|rn3|chr18 (1265350-1265251) | |
| 394-528, gnl|tetNig1|chr15_random (1295136-1295037) | |
| 394-528, gnl|xenTro1|scaffold_549 (673235-673334) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 258-381, gnl|bosTau2|chr24 (25612009-25611886) | |
| 258-381, gnl|canFam2|chr7 (70169678-70169833) | |
| 258-381, gnl|danRer3|chrNA (178475938-178476089) | |
| 258-381, gnl|dasNov1|scaffold_1560 (84998-84880) | |
| 258-381, gnl|echTel1|scaffold_296173 (19985-20140) | |
| 258-381, gnl|fr1|chrUn (196710341-196710203) | |
| 258-381, gnl|hg17|chr18 (250181-250336) | |
| 258-381, gnl|Hg17|chr18 (250309-250186) | |
| 258-381, gnl|loxAfr1|scaffold_1555 (1680-1834) | |
| 258-381, gnl|mm7|chr18 (10169048-10168901) | |
| 258-381, gnl|Mm7|chr18 (10168918-10169041) | |
| 258-381, gnl|monDom2|scaffold_21 (35370268-35370111) | |
| 258-381, gnl|oryCun1|scaffold_212922 (15876-16000) | |
| 258-381, gnl|panTro1|chr17 (12556996-12556841) | |
| 258-381, gnl|rheMac2|chr18 (13813454-13813299) | |
| 258-381, gnl|rn3|chr18 (1262650-1262503) | |
| 258-381, gnl|tetNig1|chr15_random (1294842-1294708) | |
| 258-381, gnl|xenTro1|scaffold_549 (675711-675841) | |
| 394-528, gnl|bosTau2|chr24 (25611024-25610892) | |
| 394-528, gnl|canFam2|chr7 (70168683-70168782) | |
| 394-528, gnl|danRer3|chrNA (178474216-178474314) | |
| 394-528, gnl|dasNov1|scaffold_1560 (85142-85048) | |
| 394-528, gnl|echTel1|scaffold_313706 (1017-1115) | |
| 394-528, gnl|fr1|chrUn (196710645-196710546) | |
| 394-528, gnl|galGal2|chr2 (101338521-101338422) | |
| 394-528, gnl|hg17|chr18 (249178-249277) | |
| 394-528, gnl|Hg17|chr18 (249310-249178) | |
| 394-528, gnl|loxAfr1|scaffold_1555 (715-814) | |
| 394-528, gnl|mm7|chr18 (10170472-10170373) | |
| 394-528, gnl|Mm7|chr18 (10170340-10170470) | |
| 394-528, gnl|monDom2|scaffold_21 (35371913-35371814) | |
| 394-528, gnl|oryCun1|scaffold_178278 (51059-51158) | |
| 394-528, gnl|panTro1|chr17 (12557999-12557900) | |
| 394-528, gnl|rheMac2|chr18 (13814456-13814357) | |
| 394-528, gnl|rn3|chr18 (1265350-1265251) | |
| 394-528, gnl|tetNig1|chr15_random (1295136-1295037) | |
| 394-528, gnl|xenTro1|scaffold_549 (673235-673334) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| spl (0.143184) | |
| eep (0.122564) | |
| eje (0.0988338) |