Ss1.1-reep17c_j8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAAGAGAAACAGTGTGTGAGGGGGAGAGGCCTGTTTCGCTCCCGGGTCTCTAGTTCTTG CACGCTCTTTAAGAGTCTGCATCGGAGGAACTGTGCCATTACCAGCTCCCTTCTTGCAGA AGGGAGGGGGAAACATACATTTATTCATGCCAGTCTGTTGCATGAAGGCTTTTTGGCTTC CTACCTTGCAACAAAATAATTGCACAAACTCCTTAGTGCCGATTCCGCCCACAGAGAGTC CTGGAGCCAGAGTCTTTTCTGCTTTGCATTGCAGGAGAGGGACTAAATGATAGAGACTAT GTCGCTTTCCTGAGCTCCCGAGAGCGCTCGTGAACTGGAATCAACTGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAAGAGAAACAGTGTGTGAGGGGGAGAGGCCTGTTTCGCTCCCGGGTCTCTAGTTCTTG CACGCTCTTTAAGAGTCTGCATCGGAGGAACTGTGCCATTACCAGCTCCCTTCTTGCAGA AGGGAGGGGGAAACATACATTTATTCATGCCAGTCTGTTGCATGAAGGCTTTTTGGCTTC CTACCTTGCAACAAAATAATTGCACAAACTCCTTAGTGCCGATTCCGCCCACAGAGAGTC CTGGAGCCAGAGTCTTTTCTGCTTTGCATTGCAGGAGAGGGACTAAATGATAGAGACTAT GTCGCTTTCCTGAGCTCCCGAGAGCGCTCGTGAACTGGAATCAACTGC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 40-193, + strand, RNAz p=0.775901 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 40-193, + strand, RNAz p=0.775901 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_003107, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-348, gnl|bosTau2|chr23 (29380063-29379717) | |
| 1-348, gnl|Hg17|chr6 (21701974-21702322) | |
| 1-348, gnl|Mm7|chr13 (28319231-28318880) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-348, gnl|bosTau2|chr23 (29380063-29379717) | |
| 1-348, gnl|Hg17|chr6 (21701974-21702322) | |
| 1-348, gnl|Mm7|chr13 (28319231-28318880) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| ecc (0.345105) | |
| fli (0.202881) | |
| eep (0.122564) | |
| eru (0.120048) | |
| ebs (0.118301) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ecc (0.345105) | |
| fli (0.202881) | |
| eep (0.122564) | |
| eru (0.120048) | |
| ebs (0.118301) |