Non-Coding RNA Search

Ss1.1-reep20c_h8.5

Sequence:


               
               TAAATGCCTGAAGAAAGAACAAGTCAATGAATAATTCCTATGGCTTTAGGGACAGCCGCA
AGCATCTAACATAGTGCTGGATCCTTAAACATTTGACGTTAACAATACCTGTAAAAATAC
ACACACACACACACACACGCACACACACACACACACACACACACGCCCACCACTTACCCA
CTACNACATATTGTCCTTGAGCCTTCCTGTCTTGGTAGCTAAAAGCAAACCCCACATTTC
TGTTTTAACAAAATAATCTGTGCTTTGACTTTTTGATTCCCTCTCCTCCTAGATTTTGAA
GAAGTCCTGCATCGAAATTCTAGCAGCTGAACCATCCACCATATGCGCAGGAGAGTCCTT
TCAAGTAGTGGTGAGAGGGAACGGCTTCCGACACGCCCGCAATGTGGACAGGGTCCTCTG
CAGCTTCAAGATCAACGAGTCGGTCACGCTCAGTAAGTTCTCACAGAATTTGGGGTTTTC
GTCTACCTGCTTGGGGGAAGGGAACCCCCAGCCCCATCTTCGGGGCAAGGTCATACACAG
GCAACTCCAGAGAAGGGTCTTTCCTGCTGGAACGGGCTCCAGCAAAGGCACAGCTGGCCC
CTGCGGCTCCCTTGCTCCCATCTGGAGAGGCAGTGGGCCCTTGTTTGCCCGTCCCCCAGT
GTGTGCGCCAAGTTCAAACCTCTCANGTGGCAGCATCAGCATTGCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAATGCCTGAAGAAAGAACAAGTCAATGAATAATTCCTATGGCTTTAGGGACAGCCGCA
AGCATCTAACATAGTGCTGGATCCTTAAACATTTGACGTTAACAATACCTGTAAAAATAC
ACACACACACACACACACGCACACACACACACACACACACACACGCCCACCACTTACCCA
CTACNACATATTGTCCTTGAGCCTTCCTGTCTTGGTAGCTAAAAGCAAACCCCACATTTC
TGTTTTAACAAAATAATCTGTGCTTTGACTTTTTGATTCCCTCTCCTCCTAGATTTTGAA
GAAGTCCTGCATCGAAATTCTAGCAGCTGAACCATCCACCATATGCGCAGGAGAGTCCTT
TCAAGTAGTGGTGAGAGGGAACGGCTTCCGACACGCCCGCAATGTGGACAGGGTCCTCTG
CAGCTTCAAGATCAACGAGTCGGTCACGCTCAGTAAGTTCTCACAGAATTTGGGGTTTTC
GTCTACCTGCTTGGGGGAAGGGAACCCCCAGCCCCATCTTCGGGGCAAGGTCATACACAG
GCAACTCCAGAGAAGGGTCTTTCCTGCTGGAACGGGCTCCAGCAAAGGCACAGCTGGCCC
CTGCGGCTCCCTTGCTCCCATCTGGAGAGGCAGTGGGCCCTTGTTTGCCCGTCCCCCAGT
GTGTGCGCCAAGTTCAAACCTCTCANGTGGCAGCATCAGCATTGCCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               176-353, gnl|bosTau2|chr11 (49258142-49257966)
               

               
               176-353, gnl|Hg17|chr2 (69229518-69229702)
               

               
               176-353, gnl|Mm7|chr6 (87344497-87344329)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               176-353, gnl|bosTau2|chr11 (49258142-49257966)
               

               
               176-353, gnl|Hg17|chr2 (69229518-69229702)
               

               
               176-353, gnl|Mm7|chr6 (87344497-87344329)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	176-353, gnl\|bosTau2\|chr11 (49258142-49257966)
	176-353, gnl\|Hg17\|chr2 (69229518-69229702)
	176-353, gnl\|Mm7\|chr6 (87344497-87344329)