Non-Coding RNA Search

Ss1.1-reep20c_o21.5

Sequence:


               
               AGCAGATGGCCAACCTGGAGAGCACCGAGGTCTTTATCTGCACGAGCCCCATCAAGATGT
ACAAGTACTGTCCCTTCGAGAAGTACGCCTGGGTGGAGAAGCACTTGGGCTCCGACTTTC
TGGAGCAGATCGTGCTGACCAGAGACAAGACCGTGGTCTCTGCCGACCTGCTCATAGACG
ACCGGCTGGACATTACAGGGGCCGAGCCCAACCCCAGCTGGGAACACGTCCTCTTCACTG
CCTGTCACAACAGGCACATGCAGCTGCAGCCCCCCAGCCGCAGGCTACACTCGTGGGCAG
ACGACTGGAGGGCCATCCTGGACAGCAAGCGGCCCCGCTGAGCTGCGCTGACCCCCGGCG
TCCCCCCTCAGGGCCTTACACGGATCTCGGGGCAGGGCTGGCCCAGGGTCCTGCACGGGG
CACGGCGGCCGGGCCTGGCCAGGCTGTCACCAGGGGCTCCAGGCCCCTCCCTCAGGGAAG
TCCCCGTCCCCGCCCCACAGCCGTCCACAGAGGGTGCCAGCGGCCACCTGGTCCGAGAGG
CAGCGCAGGGCTGAGCATCACACCCTCACCACAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAGATGGCCAACCTGGAGAGCACCGAGGTCTTTATCTGCACGAGCCCCATCAAGATGT
ACAAGTACTGTCCCTTCGAGAAGTACGCCTGGGTGGAGAAGCACTTGGGCTCCGACTTTC
TGGAGCAGATCGTGCTGACCAGAGACAAGACCGTGGTCTCTGCCGACCTGCTCATAGACG
ACCGGCTGGACATTACAGGGGCCGAGCCCAACCCCAGCTGGGAACACGTCCTCTTCACTG
CCTGTCACAACAGGCACATGCAGCTGCAGCCCCCCAGCCGCAGGCTACACTCGTGGGCAG
ACGACTGGAGGGCCATCCTGGACAGCAAGCGGCCCCGCTGAGCTGCGCTGACCCCCGGCG
TCCCCCCTCAGGGCCTTACACGGATCTCGGGGCAGGGCTGGCCCAGGGTCCTGCACGGGG
CACGGCGGCCGGGCCTGGCCAGGCTGTCACCAGGGGCTCCAGGCCCCTCCCTCAGGGAAG
TCCCCGTCCCCGCCCCACAGCCGTCCACAGAGGGTGCCAGCGGCCACCTGGTCCGAGAGG
CAGCGCAGGGCTGAGCATCACACCCTCACCACAGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|20127399|ref|NP_598790.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|20127399|ref|NP_598790.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               196-435, gnl|bosTau2|chr19 (26480159-26479912)
               

               
               196-435, gnl|Hg17|chr17 (17190839-17191219)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               196-435, gnl|bosTau2|chr19 (26480159-26479912)
               

               
               196-435, gnl|Hg17|chr17 (17190839-17191219)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cov (0.132153)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)
               

               
               eep (0.122564)

	196-435, gnl\|bosTau2\|chr19 (26480159-26479912)
	196-435, gnl\|Hg17\|chr17 (17190839-17191219)