Non-Coding RNA Search

Ss1.1-reep21c_d15.5

Sequence:


               
               GTTTATATGTGTGTCTAATTGGCTACTCAAAGTGGGATGGATCCCCTTTGAGTCTACTTA
CATATTGTTTCTTGACTACTTGAGTCTCTGTTTCTTTACAAGTTATCATTTAGTGGGAGA
GGACGAGGCAGAATCCTTCCCTTTGGCCAGTTGACTTGGGAGTCTGTTTGAAGGAAACAG
TCTCAACCCAGGCAGCAGCATTATAGCAGAACTCTTGGAGGAGAGTTTTCAAAATACGCA
GAGACTTGTCTGACATCACCACCATTCTCCAGTGCCTTATGGAGATCAGAGTGTGTAATG
CTGTGAAGAAGCTCCCCAGATGACTTGTGATCGATACACGTTGGTGCATGGGTTCATATA
TGTACCCTCTACAAATTTCCTTTTTGGGGCTGGTTTAGAGTAGAAGTATAATGCCAGAAA
CTGTGGGTGGAGAATGAAAAGGCTTCCTGTCTCCTCTGCTGGGTCTCTGCCTTTGCATCT
TTTGAATGTCCCCTCTTGGTGCCTTGAGTCTCTTCCTTCTGTTTTTAGCCACTCCCAGCA
GGCTTCATTGTGGTCTGACTAAGCCCTGTGTTTGGCACAAGCTGCCTCTAGGTGGACATC
TCACCCATATGTGCTCTGGGATTGATCCAAAGTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTATATGTGTGTCTAATTGGCTACTCAAAGTGGGATGGATCCCCTTTGAGTCTACTTA
CATATTGTTTCTTGACTACTTGAGTCTCTGTTTCTTTACAAGTTATCATTTAGTGGGAGA
GGACGAGGCAGAATCCTTCCCTTTGGCCAGTTGACTTGGGAGTCTGTTTGAAGGAAACAG
TCTCAACCCAGGCAGCAGCATTATAGCAGAACTCTTGGAGGAGAGTTTTCAAAATACGCA
GAGACTTGTCTGACATCACCACCATTCTCCAGTGCCTTATGGAGATCAGAGTGTGTAATG
CTGTGAAGAAGCTCCCCAGATGACTTGTGATCGATACACGTTGGTGCATGGGTTCATATA
TGTACCCTCTACAAATTTCCTTTTTGGGGCTGGTTTAGAGTAGAAGTATAATGCCAGAAA
CTGTGGGTGGAGAATGAAAAGGCTTCCTGTCTCCTCTGCTGGGTCTCTGCCTTTGCATCT
TTTGAATGTCCCCTCTTGGTGCCTTGAGTCTCTTCCTTCTGTTTTTAGCCACTCCCAGCA
GGCTTCATTGTGGTCTGACTAAGCCCTGTGTTTGGCACAAGCTGCCTCTAGGTGGACATC
TCACCCATATGTGCTCTGGGATTGATCCAAAGTACA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               32-636, gnl|bosTau2|chr22 (40638692-40639295)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               32-636, gnl|bosTau2|chr22 (40638692-40639295)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)