Ss1.1-reep22c_o16.5
|
CCTCGTGCCGAAAAAAAAAAAAAATCCCCCAAAAACCAAAACGACTTTGTGCATCCAAAA
TCATTATTAATAGTAAAAACACAACCCACAGAATAGGAGAAAATATCTTTAAGTTACACA
CCTGATGGGGGTTAATATTCAGAGTATCCCAAGAACCACTACAACCCAACATCAGCAAAA
CTAACCTGCTTAAAAACGGTCAAAAGGTCTGAAGAGACATTTCTCCAGACATACAAATGC
ACGTAGAAAGCGGCTTGGCCCCAGGCACGAAAGAAATGCAAACCAAACCACCTTGATACA
TGGCCTCACACCCATTAGATGTTTATTATAAAAACAAACATCAAAACTACCATGAGGTAC
CACCTCACACCTGCCAGAATAGCCATCATCAGGAAATCCGCAAATAACAGATGCTGGAGG
GGGTGTGGAGAAAAGGGAACCCTCCCGCACTCTTGGTGGGAATGTAAATTGGTACAACCA
CCCTGGAGAACAGTGTGGAGATTCCTCAGCAAACTAAATATGGAACTACCATATGACCCA
GCAATCCCACTCCTGGGCATATAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCTCGTGCCGAAAAAAAAAAAAAATCCCCCAAAAACCAAAACGACTTTGTGCATCCAAAA
TCATTATTAATAGTAAAAACACAACCCACAGAATAGGAGAAAATATCTTTAAGTTACACA
CCTGATGGGGGTTAATATTCAGAGTATCCCAAGAACCACTACAACCCAACATCAGCAAAA
CTAACCTGCTTAAAAACGGTCAAAAGGTCTGAAGAGACATTTCTCCAGACATACAAATGC
ACGTAGAAAGCGGCTTGGCCCCAGGCACGAAAGAAATGCAAACCAAACCACCTTGATACA
TGGCCTCACACCCATTAGATGTTTATTATAAAAACAAACATCAAAACTACCATGAGGTAC
CACCTCACACCTGCCAGAATAGCCATCATCAGGAAATCCGCAAATAACAGATGCTGGAGG
GGGTGTGGAGAAAAGGGAACCCTCCCGCACTCTTGGTGGGAATGTAAATTGGTACAACCA
CCCTGGAGAACAGTGTGGAGATTCCTCAGCAAACTAAATATGGAACTACCATATGACCCA
GCAATCCCACTCCTGGGCATATAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
10-246, gnl|bosTau2|chr15 (19654982-19655226) |
|
10-246, gnl|Hg17|chr11 (17707157-17706526) |
|
10-246, gnl|hg17|chr15 (81910858-81911587) |
|
10-246, gnl|Mm7|chr2 (106775730-106775974) |
|
10-246, gnl|rheMac2|chr14 (54208556-54207702) |
| |
|
48-239, gnl|bosTau2|chr10 (68266520-68266721) |
|
48-239, gnl|canFam2|chr8 (63260033-63260247) |
|
48-239, gnl|hg17|chr14 (88546287-88546498) |
|
48-239, gnl|Hg17|chr14 (88546286-88546484) |
|
48-239, gnl|oryCun1|scaffold_114214 (528-297) |
|
48-239, gnl|panTro1|chr15 (88802441-88802652) |
|
48-239, gnl|rheMac2|chr7 (152218021-152218234) |
| |
|
313-564, gnl|bosTau2|chr10 (22528570-22528319) |
| |
|
323-563, gnl|bosTau2|chr10 (23328653-23328412) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
10-246, gnl|bosTau2|chr15 (19654982-19655226) |
|
10-246, gnl|Hg17|chr11 (17707157-17706526) |
|
10-246, gnl|hg17|chr15 (81910858-81911587) |
|
10-246, gnl|Mm7|chr2 (106775730-106775974) |
|
10-246, gnl|rheMac2|chr14 (54208556-54207702) |
| |
|
48-239, gnl|bosTau2|chr10 (68266520-68266721) |
|
48-239, gnl|canFam2|chr8 (63260033-63260247) |
|
48-239, gnl|hg17|chr14 (88546287-88546498) |
|
48-239, gnl|Hg17|chr14 (88546286-88546484) |
|
48-239, gnl|oryCun1|scaffold_114214 (528-297) |
|
48-239, gnl|panTro1|chr15 (88802441-88802652) |
|
48-239, gnl|rheMac2|chr7 (152218021-152218234) |
| |
|
313-564, gnl|bosTau2|chr10 (22528570-22528319) |
| |
|
323-563, gnl|bosTau2|chr10 (23328653-23328412) |
|
hlv (0.139256) |
|
eep (0.122564) |
|
hlv (0.139256) |
|
eep (0.122564) |
