Non-Coding RNA Search

Ss1.1-reep22c_o17.5

Sequence:


               
               GGGATTCGGCGGCCGGGAGGGAGTCTTTGGCGCCGCGGCCGCTGTGGACTGACGCCCGCC
TGCCAGCTGAGAGCCTCCTGAGATTCTGCTTTGGCACCTCCAGAGTTTGGCCTCTGCTCA
GGGGAAAGAAGCAACCAACAAAATACAGTAATAACAAGGATTATTCACGGTGGCATTTGG
AGGATGTCCATGGCAACATTGAAAATGAATTCCTTATTTTCACCAGATATATGAGAAGAT
TCATTTTAAACAGTCTAAATACTTTTTCTTCTGTTGGAACAGCATGGCAGGATTCAAGCG
AGGGTATGATGGGAAGATTGCTGGATTATATGATCTGGATAAAACCTTGGGTCGAGGTCA
TTTTGCGGTGGTTAAACTTGCCAGGCATGTCTTTACAGGTGAAAAAGTGGCAGTAAAAGT
TATTGACAAGACAAAATTGGACACTCTAGCCACTGGTCATCTTTTCCAAGAAGTGAGATG
CATGAAACTAGTGCAGCATCCCAACATCGTACGCCTTTACGAAGTTATCGACACCCAGAC
CAAACTGTATCTTATTCTAGAGCTTGGGGATGTAGGAGACATGTTTGATTACATAATGAA
ACACGAGGAGGGACTTAATGAAGACTTGGCCAAGAAGTACTTTGCTCAGATAGTTCATGC
CATATCTTATTGCCATAAAGCTCCATGTGGTTCACAGAGACTTAAAACCCGAAAATGTGG
TCTTCTTTGAAAAACAAGGTCTTGTAAAGTTGACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGATTCGGCGGCCGGGAGGGAGTCTTTGGCGCCGCGGCCGCTGTGGACTGACGCCCGCC
TGCCAGCTGAGAGCCTCCTGAGATTCTGCTTTGGCACCTCCAGAGTTTGGCCTCTGCTCA
GGGGAAAGAAGCAACCAACAAAATACAGTAATAACAAGGATTATTCACGGTGGCATTTGG
AGGATGTCCATGGCAACATTGAAAATGAATTCCTTATTTTCACCAGATATATGAGAAGAT
TCATTTTAAACAGTCTAAATACTTTTTCTTCTGTTGGAACAGCATGGCAGGATTCAAGCG
AGGGTATGATGGGAAGATTGCTGGATTATATGATCTGGATAAAACCTTGGGTCGAGGTCA
TTTTGCGGTGGTTAAACTTGCCAGGCATGTCTTTACAGGTGAAAAAGTGGCAGTAAAAGT
TATTGACAAGACAAAATTGGACACTCTAGCCACTGGTCATCTTTTCCAAGAAGTGAGATG
CATGAAACTAGTGCAGCATCCCAACATCGTACGCCTTTACGAAGTTATCGACACCCAGAC
CAAACTGTATCTTATTCTAGAGCTTGGGGATGTAGGAGACATGTTTGATTACATAATGAA
ACACGAGGAGGGACTTAATGAAGACTTGGCCAAGAAGTACTTTGCTCAGATAGTTCATGC
CATATCTTATTGCCATAAAGCTCCATGTGGTTCACAGAGACTTAAAACCCGAAAATGTGG
TCTTCTTTGAAAAACAAGGTCTTGTAAAGTTGACAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|51707537|ref|XP_143053.5|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|51707537|ref|XP_143053.5|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               176-756, gnl|bosTau2|chr22 (13801475-13800897)
               

               
               176-756, gnl|Hg17|chr3 (43319587-43320171)
               

               
               176-756, gnl|Mm7|chr9 (121844686-121845271)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               176-756, gnl|bosTau2|chr22 (13801475-13800897)
               

               
               176-756, gnl|Hg17|chr3 (43319587-43320171)
               

               
               176-756, gnl|Mm7|chr9 (121844686-121845271)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.245128)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.245128)

	176-756, gnl\|bosTau2\|chr22 (13801475-13800897)
	176-756, gnl\|Hg17\|chr3 (43319587-43320171)
	176-756, gnl\|Mm7\|chr9 (121844686-121845271)