Non-Coding RNA Search

Ss1.1-reep23c_b3.5

Sequence:


               
               CTTTGCTGTTCTCTAATCCTCCATTCCCTTGAACATAACTGGGGTAAGGGGGGGGATAGT
GGTATTTAAAAGGAGGAATTAGGTCCCTAGCCTCACTCAGTGGGTTAAGGATCTGGCATA
GCTGTGGCTGTGGTATAGGCCAGCAGCTGCAACTCTGATTCAGCCCCGAGCCTGGGAACT
TCATATGCCATGGGTATGAAAAGGGGGACAAAATTTAAAAATAAATAAACAGAGGAATTA
GGCACAAGGAACCTTTGACTTTAAGGTATATCTATTTGGTTGTCCTAGCACAGGCAAGTT
ATCCAGGTGTGCGTGTGTGCAAGTGACGTTTTAACCTATAATCAGTGTTTGGCACAGGCA
TGTTTGTTGGAATGAAGCTTGCTTCTGGTTCTTAGCATTTGTCTTAATGTTGGCATTCCA
GCTAGCTTTGTCACCGTCCCCCCGGAACCCTGCAGAGCCTATCGCTGTCCAGAGTAACCA
GCAGCTGGCGCTAAAGGTAGAGGGAGTGGTCCAGCACGGATCTAAGCCAGGACTCTTCCG
CAGAATTCAGTCCGTCTGTCTGAATGTTTCTTCCACACTGCAGAGTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTGCTGTTCTCTAATCCTCCATTCCCTTGAACATAACTGGGGTAAGGGGGGGGATAGT
GGTATTTAAAAGGAGGAATTAGGTCCCTAGCCTCACTCAGTGGGTTAAGGATCTGGCATA
GCTGTGGCTGTGGTATAGGCCAGCAGCTGCAACTCTGATTCAGCCCCGAGCCTGGGAACT
TCATATGCCATGGGTATGAAAAGGGGGACAAAATTTAAAAATAAATAAACAGAGGAATTA
GGCACAAGGAACCTTTGACTTTAAGGTATATCTATTTGGTTGTCCTAGCACAGGCAAGTT
ATCCAGGTGTGCGTGTGTGCAAGTGACGTTTTAACCTATAATCAGTGTTTGGCACAGGCA
TGTTTGTTGGAATGAAGCTTGCTTCTGGTTCTTAGCATTTGTCTTAATGTTGGCATTCCA
GCTAGCTTTGTCACCGTCCCCCCGGAACCCTGCAGAGCCTATCGCTGTCCAGAGTAACCA
GCAGCTGGCGCTAAAGGTAGAGGGAGTGGTCCAGCACGGATCTAAGCCAGGACTCTTCCG
CAGAATTCAGTCCGTCTGTCTGAATGTTTCTTCCACACTGCAGAGTAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               228-588, gnl|bosTau2|chr16 (53561719-53562087)
               

               
               228-588, gnl|Hg17|chr1 (208506883-208506540)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               228-588, gnl|bosTau2|chr16 (53561719-53562087)
               

               
               228-588, gnl|Hg17|chr1 (208506883-208506540)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.245128)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.245128)

	228-588, gnl\|bosTau2\|chr16 (53561719-53562087)
	228-588, gnl\|Hg17\|chr1 (208506883-208506540)