Ss1.1-reep23c_j3.5.5
|
AAGAGACGTTGTGAGCAATCTCAGCACAGTATGATTGGTTGCACATTAGCAGCACTTCAA
GCTCTTTTACATGGTGTACCAGAAACTTCCGGAAGCCACTGGGCAGCATACCGAGAACCC
GCCAAGATGGGGCGCGTTCGCACCAAGACCGTGAAGAAGGCTGCCCGGGTCATCATTGAG
AAGTACTACACGCGCCTGGGCAACGACTTCCACACCAACAAGCGCGTGTGCGAGGAGATT
GCCATTATTCCCAGCAAGAAGCTCCGCAACAAGATCGCAGGCTATGTCACACATCTGATG
AAGCGGATTCAGAGAGGACCAGTGAGGGGTATCTCCATTAAGCTGCAGGAGGAGGAGAGA
GAGAGGAGAGACAACTACGTGCCCGAGGTCTCAGCCCTGGATCAGGAGATCATTGAAGTA
GATCCTGACACTAAGGAGATGCTGAAACTCTTGGACTTTGGCAGTCTGTCCAACCTGCAA
GTCACTCAGCCTACAGTTGGGATGAATTTCAAAACACCACGTGGAGCCGTTTGAGTCTTT
CTGCTATGCTGTAATATTTTGAATAAACCTCAGTCAACAACAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAGAGACGTTGTGAGCAATCTCAGCACAGTATGATTGGTTGCACATTAGCAGCACTTCAA
GCTCTTTTACATGGTGTACCAGAAACTTCCGGAAGCCACTGGGCAGCATACCGAGAACCC
GCCAAGATGGGGCGCGTTCGCACCAAGACCGTGAAGAAGGCTGCCCGGGTCATCATTGAG
AAGTACTACACGCGCCTGGGCAACGACTTCCACACCAACAAGCGCGTGTGCGAGGAGATT
GCCATTATTCCCAGCAAGAAGCTCCGCAACAAGATCGCAGGCTATGTCACACATCTGATG
AAGCGGATTCAGAGAGGACCAGTGAGGGGTATCTCCATTAAGCTGCAGGAGGAGGAGAGA
GAGAGGAGAGACAACTACGTGCCCGAGGTCTCAGCCCTGGATCAGGAGATCATTGAAGTA
GATCCTGACACTAAGGAGATGCTGAAACTCTTGGACTTTGGCAGTCTGTCCAACCTGCAA
GTCACTCAGCCTACAGTTGGGATGAATTTCAAAACACCACGTGGAGCCGTTTGAGTCTTT
CTGCTATGCTGTAATATTTTGAATAAACCTCAGTCAACAACAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|48675931|ref|NP_001001634.1| |
Protein identifier
|
gi|48675931|ref|NP_001001634.1| |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
nca (4.37996) |
|
elu (4.23892) |
|
eje (4.15102) |
|
mcp (3.75427) |
|
sag (3.28887) |
|
fli (3.24609) |
|
med (3.1388) |
|
aor (2.92912) |
|
eep (2.81897) |
|
nep (2.75887) |
|
ece (2.75166) |
|
pty (2.71157) |
|
nlu (2.68353) |
|
ecc (2.64581) |
|
fty (2.63759) |
|
cbr (2.30356) |
|
nbm (2.28447) |
|
eru (2.28091) |
|
nje (2.15696) |
|
cbe (2.15311) |
|
nmm (2.12483) |
|
cst (2.10055) |
|
ese (2.02404) |
|
cje (1.98282) |
|
sto (1.97806) |
|
nco (1.94081) |
|
che (1.9084) |
|
rec (1.90377) |
|
eye (1.87553) |
|
lnt (1.85001) |
|
eli (1.82177) |
|
spc (1.81385) |
|
cga (1.67457) |
|
ill (1.58033) |
|
jca (1.48148) |
|
mas (1.47213) |
|
cki (1.32188) |
|
cmu (1.30475) |
|
sme (1.22175) |
|
ebs (1.18301) |
|
col (1.17005) |
|
fce (1.08637) |
|
cag (1.05836) |
|
duo (1.03681) |
|
cut (1.01954) |
|
hlv (0.974795) |
|
mga (0.96123) |
|
ova (0.903926) |
|
bfe (0.899146) |
|
hyp (0.85702) |
|
nms (0.855432) |
|
fhi (0.847889) |
|
csk (0.70373) |
|
ton (0.702001) |
|
fbs (0.701385) |
|
jej (0.692452) |
|
vin (0.665115) |
|
fcc (0.593354) |
|
ski (0.586941) |
|
lyg (0.532411) |
|
ute (0.531138) |
|
cov (0.528611) |
|
cli (0.458435) |
|
sug (0.381874) |
|
csp (0.322373) |
|
ste (0.270416) |
|
pla (0.267344) |
|
thg (0.253582) |
|
mgp (0.230681) |
|
gul (0.177588) |
|
sin (0.174948) |
|
fco (0.157208) |
|
tbr (0.154178) |
|
isp (0.150376) |
|
fat (0.147427) |
|
ssp (0.13552) |
|
pgl (0.118483) |
|
ldo (0.0970026) |
|
nca (4.37996) |
|
elu (4.23892) |
|
eje (4.15102) |
|
mcp (3.75427) |
|
sag (3.28887) |
|
fli (3.24609) |
|
med (3.1388) |
|
aor (2.92912) |
|
eep (2.81897) |
|
nep (2.75887) |
|
ece (2.75166) |
|
pty (2.71157) |
|
nlu (2.68353) |
|
ecc (2.64581) |
|
fty (2.63759) |
|
cbr (2.30356) |
|
nbm (2.28447) |
|
eru (2.28091) |
|
nje (2.15696) |
|
cbe (2.15311) |
|
nmm (2.12483) |
|
cst (2.10055) |
|
ese (2.02404) |
|
cje (1.98282) |
|
sto (1.97806) |
|
nco (1.94081) |
|
che (1.9084) |
|
rec (1.90377) |
|
eye (1.87553) |
|
lnt (1.85001) |
|
eli (1.82177) |
|
spc (1.81385) |
|
cga (1.67457) |
|
ill (1.58033) |
|
jca (1.48148) |
|
mas (1.47213) |
|
cki (1.32188) |
|
cmu (1.30475) |
|
sme (1.22175) |
|
ebs (1.18301) |
|
col (1.17005) |
|
fce (1.08637) |
|
cag (1.05836) |
|
duo (1.03681) |
|
cut (1.01954) |
|
hlv (0.974795) |
|
mga (0.96123) |
|
ova (0.903926) |
|
bfe (0.899146) |
|
hyp (0.85702) |
|
nms (0.855432) |
|
fhi (0.847889) |
|
csk (0.70373) |
|
ton (0.702001) |
|
fbs (0.701385) |
|
jej (0.692452) |
|
vin (0.665115) |
|
fcc (0.593354) |
|
ski (0.586941) |
|
lyg (0.532411) |
|
ute (0.531138) |
|
cov (0.528611) |
|
cli (0.458435) |
|
sug (0.381874) |
|
csp (0.322373) |
|
ste (0.270416) |
|
pla (0.267344) |
|
thg (0.253582) |
|
mgp (0.230681) |
|
gul (0.177588) |
|
sin (0.174948) |
|
fco (0.157208) |
|
tbr (0.154178) |
|
isp (0.150376) |
|
fat (0.147427) |
|
ssp (0.13552) |
|
pgl (0.118483) |
|
ldo (0.0970026) |
