Ss1.1-reep24c_c21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATGCCTGAGTATCCTCTAGATAAACCAGATGCAGACGGGAACACCGTGCTGCTCTTAGC GTACATGAAAGGGAACGCCAACTTGTGCCGCGCCATTGTCCGGTCCGGGGCTCGCCTGGG GGTCACCAATAACCAAGGAGTCAACATCTTCAACTACCAGGTTGCCACCAAGCAGCTGCT CTTTAGACTCTTAGATATGCTGTCCAAGGAGCCTCCGTGGTGCGACGGCTCCAATTGCTA CGAGTGCACGGCCAAGTTTGGAGTCACTGCTCGCAAACATCACTGTCGTCACTGCGGACG CCTTCTGTGCCATAAATGCTCGACCAAGGAGATTCCTATTATAAAGTTTGATCTGAACAA GCCCGTGCGAGTTTGCAACATCTGCTTTGATGTGCTCACTTTGGGCGGGGTCTCTTAGTG AGCCCCCAGGAAGGGCCAGGCCACATCCTCGGTCGCCTCCCCAGCAGCTGCTCTGCCCAC CAGCCTGACCCGCCCAGAGCAGGAGCTGGCAGTCGTCCTCCCGCGGCAACAGACTGGAAC AATTAAGGACCAAATGGCGTGATCGATCTCTTCAAATGATTCTGTATGATTGTTGTGTGT CGGACTGTGATCGAGGTCACGAGTTGTCTCATTAATTGGACCAGGCCATGTAGCCTAGGT GGTCAGTGTGATAGGAATTAGTCCCCATTTTGCTAGCAACATCCAAGGCCACTTCGGAAA CCATTTCCCTTCCAGTAGCCCGGTGTCTGTCTCAGAGCGTTCGTGAAGTCTTCCTGCCTG GACGGACTTTCTAGGCAGAGCCTGACCGTCCGTACGGCAGCTGGCGCGCCCAGCGGCTCG ACGAGAGCTGGCTTTACTCCAGGGTAAGTGGCTGCGGACTTTTCTGCACAATGTTTTCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATGCCTGAGTATCCTCTAGATAAACCAGATGCAGACGGGAACACCGTGCTGCTCTTAGC GTACATGAAAGGGAACGCCAACTTGTGCCGCGCCATTGTCCGGTCCGGGGCTCGCCTGGG GGTCACCAATAACCAAGGAGTCAACATCTTCAACTACCAGGTTGCCACCAAGCAGCTGCT CTTTAGACTCTTAGATATGCTGTCCAAGGAGCCTCCGTGGTGCGACGGCTCCAATTGCTA CGAGTGCACGGCCAAGTTTGGAGTCACTGCTCGCAAACATCACTGTCGTCACTGCGGACG CCTTCTGTGCCATAAATGCTCGACCAAGGAGATTCCTATTATAAAGTTTGATCTGAACAA GCCCGTGCGAGTTTGCAACATCTGCTTTGATGTGCTCACTTTGGGCGGGGTCTCTTAGTG AGCCCCCAGGAAGGGCCAGGCCACATCCTCGGTCGCCTCCCCAGCAGCTGCTCTGCCCAC CAGCCTGACCCGCCCAGAGCAGGAGCTGGCAGTCGTCCTCCCGCGGCAACAGACTGGAAC AATTAAGGACCAAATGGCGTGATCGATCTCTTCAAATGATTCTGTATGATTGTTGTGTGT CGGACTGTGATCGAGGTCACGAGTTGTCTCATTAATTGGACCAGGCCATGTAGCCTAGGT GGTCAGTGTGATAGGAATTAGTCCCCATTTTGCTAGCAACATCCAAGGCCACTTCGGAAA CCATTTCCCTTCCAGTAGCCCGGTGTCTGTCTCAGAGCGTTCGTGAAGTCTTCCTGCCTG GACGGACTTTCTAGGCAGAGCCTGACCGTCCGTACGGCAGCTGGCGCGCCCAGCGGCTCG ACGAGAGCTGGCTTTACTCCAGGGTAAGTGGCTGCGGACTTTTCTGCACAATGTTTTCAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 47-194, gnl|bosTau2|chr19 (19296096-19295949) | |
| 47-194, gnl|canFam2|chr5 (33244100-33244280) | |
| 47-194, gnl|danRer3|chr5 (26065260-26065425) | |
| 47-194, gnl|echTel1|scaffold_289846 (35303-35124) | |
| 47-194, gnl|fr1|chrUn (222940571-222940751) | |
| 47-194, gnl|galGal2|chr19 (2954471-2954304) | |
| 47-194, gnl|hg17|chr17 (4020753-4020933) | |
| 47-194, gnl|Hg17|chr17 (4020905-4020758) | |
| 47-194, gnl|loxAfr1|scaffold_20421 (75893-75714) | |
| 47-194, gnl|mm7|chr11 (72843090-72842910) | |
| 47-194, gnl|Mm7|chr11 (72842936-72843083) | |
| 47-194, gnl|monDom2|scaffold_310 (54186-54003) | |
| 47-194, gnl|oryCun1|scaffold_151969 (841-661) | |
| 47-194, gnl|panTro1|chr19 (4324103-4324283) | |
| 47-194, gnl|rheMac2|chr16 (3898183-3898363) | |
| 47-194, gnl|rn3|chr10 (59660300-59660120) | |
| 47-194, gnl|tetNig1|chr7 (1682260-1682104) | |
| 47-194, gnl|xenTro1|scaffold_21 (2332864-2333029) | |
| 281-896, gnl|bosTau2|chr19 (19294351-19293745) | |
| 281-896, gnl|Hg17|chr17 (4017959-4017345) | |
| 281-896, gnl|Mm7|chr11 (72849082-72849670) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 47-194, gnl|bosTau2|chr19 (19296096-19295949) | |
| 47-194, gnl|canFam2|chr5 (33244100-33244280) | |
| 47-194, gnl|danRer3|chr5 (26065260-26065425) | |
| 47-194, gnl|echTel1|scaffold_289846 (35303-35124) | |
| 47-194, gnl|fr1|chrUn (222940571-222940751) | |
| 47-194, gnl|galGal2|chr19 (2954471-2954304) | |
| 47-194, gnl|hg17|chr17 (4020753-4020933) | |
| 47-194, gnl|Hg17|chr17 (4020905-4020758) | |
| 47-194, gnl|loxAfr1|scaffold_20421 (75893-75714) | |
| 47-194, gnl|mm7|chr11 (72843090-72842910) | |
| 47-194, gnl|Mm7|chr11 (72842936-72843083) | |
| 47-194, gnl|monDom2|scaffold_310 (54186-54003) | |
| 47-194, gnl|oryCun1|scaffold_151969 (841-661) | |
| 47-194, gnl|panTro1|chr19 (4324103-4324283) | |
| 47-194, gnl|rheMac2|chr16 (3898183-3898363) | |
| 47-194, gnl|rn3|chr10 (59660300-59660120) | |
| 47-194, gnl|tetNig1|chr7 (1682260-1682104) | |
| 47-194, gnl|xenTro1|scaffold_21 (2332864-2333029) | |
| 281-896, gnl|bosTau2|chr19 (19294351-19293745) | |
| 281-896, gnl|Hg17|chr17 (4017959-4017345) | |
| 281-896, gnl|Mm7|chr11 (72849082-72849670) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) | |
| eep (0.122564) | |
| cly (0.120642) |