Ss1.1-reep25c_p20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGTCCCACCCACAAAGATGTGGGCTCAACTCCTTCTAGGAATATTGGCCCTATGGCCAG CTGTGGCAGAGAAACTCCTCCCAAACTATCTGGTGACATTACCTGCCCAGCTTGTGTTCC CCTCTACTCAGAAGGTTTGTTTGGATCTGAGTCCTGGGTACGATGCTGTAAAGTTCACTG TCACTCTGGAGACCAAGGACAGGATCCTCACGTTGTTGCGACAGTCTGGACTGAAGACAC GACACTTACATTGCAGGTCCTTTTTGGTACCACTTCCTGCGGATGGGAGAGAAGAAGTGG CCACCGTCCGGGTGTCGGGAACTGGAAAGGGCATCAGCTTTGAGGAGAAGAAAAAGGTTC TAATTCAGAGGCAGCAGAATGGCCTCTTTATACAAACTGACAAACCTGTGTACAACCCAG GGCAGAAAGTGCAACTCCGCATTGTCACTTTGACCAGCAGCTTCATTCCAGTGAATGACA AGTACTCCTTGGTGGAACTGCAAGATCCAAATAACAACAGGATTGCACAATGGCTGGATG TGGTGCCCAAGCAAGGCATTGTAGACCTGTCCTTCCAGCTGGCACCGGAGGCGACGCTGG GCACCTACAGAGTGGCTGTGAATGGGGGCGAGGGCCAGAGCTTTGGCACCTTCAGTGTGG AAGAGTATGTGCTGCCCAAGTTTAAGGTAGAAGTAGTGGAACCCAAACAGTTATCAACAG TGGAAGACTCTTTCTTAGTGAAAGTTTGTTGCAGGTACACCTACGGGAAGCCCATACTTG GGATAGTGCACGTATCCGTGTGTCAAAAGGCGAATACTTACAGGTTTCGAGAGCCAGAAT TGGAACAGCTACCTGACAGATGCAGGAACATCTCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGTCCCACCCACAAAGATGTGGGCTCAACTCCTTCTAGGAATATTGGCCCTATGGCCAG CTGTGGCAGAGAAACTCCTCCCAAACTATCTGGTGACATTACCTGCCCAGCTTGTGTTCC CCTCTACTCAGAAGGTTTGTTTGGATCTGAGTCCTGGGTACGATGCTGTAAAGTTCACTG TCACTCTGGAGACCAAGGACAGGATCCTCACGTTGTTGCGACAGTCTGGACTGAAGACAC GACACTTACATTGCAGGTCCTTTTTGGTACCACTTCCTGCGGATGGGAGAGAAGAAGTGG CCACCGTCCGGGTGTCGGGAACTGGAAAGGGCATCAGCTTTGAGGAGAAGAAAAAGGTTC TAATTCAGAGGCAGCAGAATGGCCTCTTTATACAAACTGACAAACCTGTGTACAACCCAG GGCAGAAAGTGCAACTCCGCATTGTCACTTTGACCAGCAGCTTCATTCCAGTGAATGACA AGTACTCCTTGGTGGAACTGCAAGATCCAAATAACAACAGGATTGCACAATGGCTGGATG TGGTGCCCAAGCAAGGCATTGTAGACCTGTCCTTCCAGCTGGCACCGGAGGCGACGCTGG GCACCTACAGAGTGGCTGTGAATGGGGGCGAGGGCCAGAGCTTTGGCACCTTCAGTGTGG AAGAGTATGTGCTGCCCAAGTTTAAGGTAGAAGTAGTGGAACCCAAACAGTTATCAACAG TGGAAGACTCTTTCTTAGTGAAAGTTTGTTGCAGGTACACCTACGGGAAGCCCATACTTG GGATAGTGCACGTATCCGTGTGTCAAAAGGCGAATACTTACAGGTTTCGAGAGCCAGAAT TGGAACAGCTACCTGACAGATGCAGGAACATCTCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 83-269, gnl|bosTau2|chr5 (59644055-59643869) | |
| 83-269, gnl|canFam2|chr27 (39908986-39908696) | |
| 83-269, gnl|dasNov1|scaffold_9937 (45368-45078) | |
| 83-269, gnl|echTel1|scaffold_285632 (3406-3120) | |
| 83-269, gnl|hg17|chr12 (8867048-8867333) | |
| 83-269, gnl|Hg17|chr12 (8867047-8867231) | |
| 83-269, gnl|loxAfr1|scaffold_10616 (44318-44030) | |
| 83-269, gnl|mm7|chr6 (122435166-122434864) | |
| 83-269, gnl|Mm7|chr6 (122435166-122434980) | |
| 83-269, gnl|oryCun1|scaffold_212678 (1248-1537) | |
| 83-269, gnl|panTro1|chrUn_random (58235807-58235522) | |
| 83-269, gnl|rheMac2|chr11 (8958781-8959103) | |
| 83-269, gnl|rn3|chr4 (159073626-159073305) | |
| 501-669, gnl|bosTau2|chr5 (59636929-59636767) | |
| 501-669, gnl|canFam2|chr27 (39901939-39901790) | |
| 501-669, gnl|danRer3|chrNA (89159553-89159694) | |
| 501-669, gnl|dasNov1|scaffold_9937 (39322-39172) | |
| 501-669, gnl|echTel1|scaffold_68433 (1447-1596) | |
| 501-669, gnl|fr1|chrUn (125210664-125210808) | |
| 501-669, gnl|hg17|chr12 (8879347-8879493) | |
| 501-669, gnl|Hg17|chr12 (8879367-8879529) | |
| 501-669, gnl|loxAfr1|scaffold_10616 (36330-36181) | |
| 501-669, gnl|mm7|chr6 (122425827-122425681) | |
| 501-669, gnl|Mm7|chr6 (122425801-122425643) | |
| 501-669, gnl|oryCun1|scaffold_212678 (5539-5678) | |
| 501-669, gnl|panTro1|chrUn_random (58223864-58223718) | |
| 501-669, gnl|rheMac2|chr11 (8973126-8973272) | |
| 501-669, gnl|rn3|chr4 (159066569-159066428) | |
| 501-669, gnl|tetNig1|chr16 (8124737-8124614) | |
| 753-876, gnl|bosTau2|chr5 (59634832-59634709) | |
| 753-876, gnl|Hg17|chr12 (8881301-8881601) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 83-269, gnl|bosTau2|chr5 (59644055-59643869) | |
| 83-269, gnl|canFam2|chr27 (39908986-39908696) | |
| 83-269, gnl|dasNov1|scaffold_9937 (45368-45078) | |
| 83-269, gnl|echTel1|scaffold_285632 (3406-3120) | |
| 83-269, gnl|hg17|chr12 (8867048-8867333) | |
| 83-269, gnl|Hg17|chr12 (8867047-8867231) | |
| 83-269, gnl|loxAfr1|scaffold_10616 (44318-44030) | |
| 83-269, gnl|mm7|chr6 (122435166-122434864) | |
| 83-269, gnl|Mm7|chr6 (122435166-122434980) | |
| 83-269, gnl|oryCun1|scaffold_212678 (1248-1537) | |
| 83-269, gnl|panTro1|chrUn_random (58235807-58235522) | |
| 83-269, gnl|rheMac2|chr11 (8958781-8959103) | |
| 83-269, gnl|rn3|chr4 (159073626-159073305) | |
| 501-669, gnl|bosTau2|chr5 (59636929-59636767) | |
| 501-669, gnl|canFam2|chr27 (39901939-39901790) | |
| 501-669, gnl|danRer3|chrNA (89159553-89159694) | |
| 501-669, gnl|dasNov1|scaffold_9937 (39322-39172) | |
| 501-669, gnl|echTel1|scaffold_68433 (1447-1596) | |
| 501-669, gnl|fr1|chrUn (125210664-125210808) | |
| 501-669, gnl|hg17|chr12 (8879347-8879493) | |
| 501-669, gnl|Hg17|chr12 (8879367-8879529) | |
| 501-669, gnl|loxAfr1|scaffold_10616 (36330-36181) | |
| 501-669, gnl|mm7|chr6 (122425827-122425681) | |
| 501-669, gnl|Mm7|chr6 (122425801-122425643) | |
| 501-669, gnl|oryCun1|scaffold_212678 (5539-5678) | |
| 501-669, gnl|panTro1|chrUn_random (58223864-58223718) | |
| 501-669, gnl|rheMac2|chr11 (8973126-8973272) | |
| 501-669, gnl|rn3|chr4 (159066569-159066428) | |
| 501-669, gnl|tetNig1|chr16 (8124737-8124614) | |
| 753-876, gnl|bosTau2|chr5 (59634832-59634709) | |
| 753-876, gnl|Hg17|chr12 (8881301-8881601) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.245128) |