Non-Coding RNA Search

Ss1.1-reep26c_b1.5

Sequence:


               
               TTATATTAATAGTTTAATCTCTTAGTATATTTAAAAATAAATATGGAAATTCCTAAATTA
CACAATTGGAATTTGTGAACGCATTGTACAACTGTATTATACCGATAAACCCAGTTTGTT
AATCTGTGTTCTAGATCAATCCAAGTGAGGCAAATGAATTGAGAGAATTGATTTACACCT
ACAACAAATATTTTAAGACTTATTTGTTAGTTATGACACAAAATTAATTAGTATACTGAT
ATTTGTAGATTATTTTAATGATAAAATGACATTAAGCTATTAATATAGCTTATCTTAAGC
TATTTAAAGCATGCTCTGAAATCCTATATATAAAAGTATAAACTGAACTTTAAGGTGCCT
CCATTTATCAAGGGTTATGAAATTCAGAAAATTAAATTCATGACACTGACCTTTTACTGT
AAGAGAATTTCCTTGTGAATTGCAGACTTGTCAGTGAATTTATTACTCAGTTGGGATGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATATTAATAGTTTAATCTCTTAGTATATTTAAAAATAAATATGGAAATTCCTAAATTA
CACAATTGGAATTTGTGAACGCATTGTACAACTGTATTATACCGATAAACCCAGTTTGTT
AATCTGTGTTCTAGATCAATCCAAGTGAGGCAAATGAATTGAGAGAATTGATTTACACCT
ACAACAAATATTTTAAGACTTATTTGTTAGTTATGACACAAAATTAATTAGTATACTGAT
ATTTGTAGATTATTTTAATGATAAAATGACATTAAGCTATTAATATAGCTTATCTTAAGC
TATTTAAAGCATGCTCTGAAATCCTATATATAAAAGTATAAACTGAACTTTAAGGTGCCT
CCATTTATCAAGGGTTATGAAATTCAGAAAATTAAATTCATGACACTGACCTTTTACTGT
AAGAGAATTTCCTTGTGAATTGCAGACTTGTCAGTGAATTTATTACTCAGTTGGGATGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-480, gnl|bosTau2|chr1 (6615540-6616034)
               

               
               1-480, gnl|Hg17|chr21 (29224400-29223908)
               

               
               1-480, gnl|Mm7|chr16 (87420680-87420177)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr1 (6615540-6616034)
               

               
               1-480, gnl|Hg17|chr21 (29224400-29223908)
               

               
               1-480, gnl|Mm7|chr16 (87420680-87420177)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.146284)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               eep (0.122564)

	1-480, gnl\|bosTau2\|chr1 (6615540-6616034)
	1-480, gnl\|Hg17\|chr21 (29224400-29223908)
	1-480, gnl\|Mm7\|chr16 (87420680-87420177)