Non-Coding RNA Search

Ss1.1-reep26c_d3.5

Sequence:


               
               AATATTGTGTGGGCTCGAGAGTGCGTCTCCGGGCTCCGGCAGGATCCGAACCCGCGGCGC
CTAATTGCTGCGCACTGAGTTTGCATGAACTTCCCCGGCGCTGCAGGCACGACTGCTGCG
CTCCCGACTCCAGACCGCACACCTCCCTGTTTTTACAACAGCAGTGACTGTCTTTTCCAA
CCCGACATGGATGTGCTCCCAATGTGCAGCATCTTCCAGGAACTCCAGATTGTGCACGAG
ACTGGTTACTTCTCGGCGCTGCCCTCCCTGGAGGAATATTGGCAACAGACCTGCCTGGAG
TTGGAGCGTTACCTCCAGAGCGAACCCTGCTATGTGTCAGCCTCTGAAATCAAATTCGAC
AGCCAGGAAGACCTGTGGACCAAAATCATCCTGGCGCGGGAGCAAAAGGAGGATGCGGAC
CTGAAGATGTCCTCCAGCCCCCCCGAGGATGCTCTCAACAGCCCCGGCTTTGGCTACAAC
CTGGAGACCAACAGCCTGAACTCGGACGTGAGCAGCGAATCGTCCGACAGCTCCGAGGAG
CTGTCCCCCACCACCAAGTTTACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATATTGTGTGGGCTCGAGAGTGCGTCTCCGGGCTCCGGCAGGATCCGAACCCGCGGCGC
CTAATTGCTGCGCACTGAGTTTGCATGAACTTCCCCGGCGCTGCAGGCACGACTGCTGCG
CTCCCGACTCCAGACCGCACACCTCCCTGTTTTTACAACAGCAGTGACTGTCTTTTCCAA
CCCGACATGGATGTGCTCCCAATGTGCAGCATCTTCCAGGAACTCCAGATTGTGCACGAG
ACTGGTTACTTCTCGGCGCTGCCCTCCCTGGAGGAATATTGGCAACAGACCTGCCTGGAG
TTGGAGCGTTACCTCCAGAGCGAACCCTGCTATGTGTCAGCCTCTGAAATCAAATTCGAC
AGCCAGGAAGACCTGTGGACCAAAATCATCCTGGCGCGGGAGCAAAAGGAGGATGCGGAC
CTGAAGATGTCCTCCAGCCCCCCCGAGGATGCTCTCAACAGCCCCGGCTTTGGCTACAAC
CTGGAGACCAACAGCCTGAACTCGGACGTGAGCAGCGAATCGTCCGACAGCTCCGAGGAG
CTGTCCCCCACCACCAAGTTTACC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|2745960|gb|AAB94792.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|2745960|gb|AAB94792.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-288, gnl|bosTau2|chr13 (29628290-29628000)
               

               
               1-288, gnl|Hg17|chr10 (3817380-3817105)
               

               
               1-288, gnl|Mm7|chr13 (5746573-5746855)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-288, gnl|bosTau2|chr13 (29628290-29628000)
               

               
               1-288, gnl|Hg17|chr10 (3817380-3817105)
               

               
               1-288, gnl|Mm7|chr13 (5746573-5746855)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nje (0.16592)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)
               

               
               eep (0.122564)

	1-288, gnl\|bosTau2\|chr13 (29628290-29628000)
	1-288, gnl\|Hg17\|chr10 (3817380-3817105)
	1-288, gnl\|Mm7\|chr13 (5746573-5746855)