Non-Coding RNA Search

Ss1.1-reep27c_p21.5

Sequence:


               
               TGTGAACAACTATGGCCCCATCATCCTAGCTGTGCACAGGACTCCAGAGAGTGTCATCTA
TCCTTCCATGTGCTGGATCCGTGACTCCCTGGTCAGCCATGTCACCAACCTGGGCCTCTT
CAGCCTGGTGTTTCTGTTCAACATGGCCATGCTGGGCACCATGGTGGTACAGATCCTGCG
GCTGCGCCCACATGCCCAGAAGTGGCCCCATGTGCTGACACTACTGGGCCTCAGTCTGGT
CCTTGGCCTGCCCTGGGCCTTGGTCTTTTTCTCCTTTGCTTCTGGCACCTTCCAGCTTGT
CGTCCTCTATTTCTTCAGCATCATCACCTCCTTCCAAGGCTTCCTCATCTTCCTCTGGTA
CTGGTCCATGCGCCTGCAGGCCCGGGGCGGGCCTTCCCCTCTGAAGAGCAGCTCAGACAG
TGCCAGGCTCCCCATCAGCTCTGGCAGCACCTCGTCCAGCCGCATCTAGGCCACCAGCCC
CCCGCCGGTGTGAGGAAGCCGAGATGCAACCTCTCTTCACTGCTCCCTGTGGCTGCTTCA
GCCAGGCCCGGCCCTTGGTGAGCGAGCCGGAGCCTTGAGAGGGCCCGAGGACCTTGGAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGAACAACTATGGCCCCATCATCCTAGCTGTGCACAGGACTCCAGAGAGTGTCATCTA
TCCTTCCATGTGCTGGATCCGTGACTCCCTGGTCAGCCATGTCACCAACCTGGGCCTCTT
CAGCCTGGTGTTTCTGTTCAACATGGCCATGCTGGGCACCATGGTGGTACAGATCCTGCG
GCTGCGCCCACATGCCCAGAAGTGGCCCCATGTGCTGACACTACTGGGCCTCAGTCTGGT
CCTTGGCCTGCCCTGGGCCTTGGTCTTTTTCTCCTTTGCTTCTGGCACCTTCCAGCTTGT
CGTCCTCTATTTCTTCAGCATCATCACCTCCTTCCAAGGCTTCCTCATCTTCCTCTGGTA
CTGGTCCATGCGCCTGCAGGCCCGGGGCGGGCCTTCCCCTCTGAAGAGCAGCTCAGACAG
TGCCAGGCTCCCCATCAGCTCTGGCAGCACCTCGTCCAGCCGCATCTAGGCCACCAGCCC
CCCGCCGGTGTGAGGAAGCCGAGATGCAACCTCTCTTCACTGCTCCCTGTGGCTGCTTCA
GCCAGGCCCGGCCCTTGGTGAGCGAGCCGGAGCCTTGAGAGGGCCCGAGGACCTTGGAGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               67-339, gnl|bosTau2|chr18 (22581942-22582214)
               

               
               67-339, gnl|Hg17|chr16 (56253107-56253379)
               

               
               67-339, gnl|Mm7|chr8 (93600588-93600858)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-339, gnl|bosTau2|chr18 (22581942-22582214)
               

               
               67-339, gnl|Hg17|chr16 (56253107-56253379)
               

               
               67-339, gnl|Mm7|chr8 (93600588-93600858)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eep (0.122564)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)
               

               
               eje (0.0988338)

	67-339, gnl\|bosTau2\|chr18 (22581942-22582214)
	67-339, gnl\|Hg17\|chr16 (56253107-56253379)
	67-339, gnl\|Mm7\|chr8 (93600588-93600858)