Non-Coding RNA Search

Ss1.1-reep28c_c7.5

Sequence:


               
               TGGTGGAGTGTCGGGTGCGATTCCTGTCCTTCATGGGCGTCGGGAAGGACGTGCACACGT
TTGCCTTCATCATGGACACTGGGAACCAGCACTTCGAGTGCCACGTTTTCTGGTGCGAGC
CTAACGCCGCGAACGTGTCAGAGGCCGTGCAGGCCGCCTGCATGTTACGATACCAGAAGT
GCTTGGTAGCCAGGCCGCCTTCACAGAAAGTCCGACCACCTCCTCCGCCAGCAGACTCAG
TGACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGACACTTTGA
AACAGAAACGCCCAGTCACAGAAACACCATAGCTGCAGATGTGAAAGGACTCTGTTACTG
AAGACTGAATAGCTACACTAAAGAAAAGGAGCTGATCTCTGGCCTTCCATTCAGTTGCTG
ATGCTTTGTCTTCAGAGAATTTATCCTTAACCCAACAGTGTTAGACAAGCATGTTCTCTC
GTCTTGCCACCATCGTGTGATATGAAAAGAAGCATGACTAATTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTGGAGTGTCGGGTGCGATTCCTGTCCTTCATGGGCGTCGGGAAGGACGTGCACACGT
TTGCCTTCATCATGGACACTGGGAACCAGCACTTCGAGTGCCACGTTTTCTGGTGCGAGC
CTAACGCCGCGAACGTGTCAGAGGCCGTGCAGGCCGCCTGCATGTTACGATACCAGAAGT
GCTTGGTAGCCAGGCCGCCTTCACAGAAAGTCCGACCACCTCCTCCGCCAGCAGACTCAG
TGACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGACACTTTGA
AACAGAAACGCCCAGTCACAGAAACACCATAGCTGCAGATGTGAAAGGACTCTGTTACTG
AAGACTGAATAGCTACACTAAAGAAAAGGAGCTGATCTCTGGCCTTCCATTCAGTTGCTG
ATGCTTTGTCTTCAGAGAATTTATCCTTAACCCAACAGTGTTAGACAAGCATGTTCTCTC
GTCTTGCCACCATCGTGTGATATGAAAAGAAGCATGACTAATTTTTTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               P70415_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               P70415_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-167, gnl|bosTau2|chr15 (28625747-28625581)
               

               
               1-167, gnl|Hg17|chr11 (6373755-6373589)
               

               
               1-167, gnl|Mm7|chr7 (101615716-101615550)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-167, gnl|bosTau2|chr15 (28625747-28625581)
               

               
               1-167, gnl|Hg17|chr11 (6373755-6373589)
               

               
               1-167, gnl|Mm7|chr7 (101615716-101615550)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               eep (0.245128)
               

               
               cmu (0.186393)
               

               
               eye (0.170503)
               

               
               tbr (0.154178)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.245128)
               

               
               cmu (0.186393)
               

               
               eye (0.170503)
               

               
               tbr (0.154178)

	1-167, gnl\|bosTau2\|chr15 (28625747-28625581)
	1-167, gnl\|Hg17\|chr11 (6373755-6373589)
	1-167, gnl\|Mm7\|chr7 (101615716-101615550)