Non-Coding RNA Search

Ss1.1-reep28c_d18.5

Sequence:


               
               GTCGCAGAAGGGGCGGCTCTGGAGGCGCTGAGCGCTCCCCGCTCCGGACCGGGCGAGGGA
CGCGTGCTGTGGTCGGCCGGTGACCGGCGTTGGCAACAGGCCACCGGCCCCACAGCTGAA
GACGGACTCCGCGGGCACTTGCGCCCTGGGGCTGCGCGTGAGGCTGGCGACCAGGGGGCA
GCCGAGCCCCGGGAGCTTCCGGGGCCGGCCGTTGCCGCCGCCACCGCTGCTGGTGTTGCT
GCTCTTGGGGCTGGTGCCGGAGGGCGCGGCAGAGAGTCCCTGGGGGTTGCCCTTGGTGGC
CGATAGCCCAGCTTCCATGGCAAAGGTGGTGATGGCAGAACTGGCAGACCTGAAGTTGGA
AAAGAAACCATGGCCTAGAGGGACGCACTCCCTCCGCTACCACTACCTGGCCCTATCAGA
GCCAGGGCCAGGCCTCCCTCAGTTTCTGGCTGTAGGCTACGTGGACGACCAGGTCTTCAT
CCGGTATGATAGTCGTCGAGGCAAAGCGGAACCACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCGCAGAAGGGGCGGCTCTGGAGGCGCTGAGCGCTCCCCGCTCCGGACCGGGCGAGGGA
CGCGTGCTGTGGTCGGCCGGTGACCGGCGTTGGCAACAGGCCACCGGCCCCACAGCTGAA
GACGGACTCCGCGGGCACTTGCGCCCTGGGGCTGCGCGTGAGGCTGGCGACCAGGGGGCA
GCCGAGCCCCGGGAGCTTCCGGGGCCGGCCGTTGCCGCCGCCACCGCTGCTGGTGTTGCT
GCTCTTGGGGCTGGTGCCGGAGGGCGCGGCAGAGAGTCCCTGGGGGTTGCCCTTGGTGGC
CGATAGCCCAGCTTCCATGGCAAAGGTGGTGATGGCAGAACTGGCAGACCTGAAGTTGGA
AAAGAAACCATGGCCTAGAGGGACGCACTCCCTCCGCTACCACTACCTGGCCCTATCAGA
GCCAGGGCCAGGCCTCCCTCAGTTTCTGGCTGTAGGCTACGTGGACGACCAGGTCTTCAT
CCGGTATGATAGTCGTCGAGGCAAAGCGGAACCACA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               271-381, gnl|bosTau2|chr7 (27049616-27049506)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               271-381, gnl|bosTau2|chr7 (27049616-27049506)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               eep (0.122564)