Ss1.1-reep28c_n23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGCAGATTGAAAGCCTGAATGAGGAGCTGGCCTACCTGAAGAAGAACCACGAGGAGGA AATGAGAGACCTTCAAAATGTGTCCACTGGTGATGTGAATGTGGAAATGAATGCTGCCCC TGGTGTTGATCTCACTGAACTACTGAATAACATGAGAAGCCAGTATGAACAACTTGCTGA ACAAAACCGCAGAGACGCTGAAGCCTGGTTCAATGAAAAGAGCAAGGAACTGACTACAGA AATCAACACTAACATTGAACAGGTGTCCAGCTATAAATCTGAGATTACTGAGTTGAGACG CACTATCCAAGGTCTGGAGATCGAGCTACAGTCCCAACTAGCCCTGAAACAATCCCTGGA AGCCTCCTTGGCAGAGACAGAAGGTCGCTACTGTGTGCAGCTCGCTCAGATTCAGTCCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGCAGATTGAAAGCCTGAATGAGGAGCTGGCCTACCTGAAGAAGAACCACGAGGAGGA AATGAGAGACCTTCAAAATGTGTCCACTGGTGATGTGAATGTGGAAATGAATGCTGCCCC TGGTGTTGATCTCACTGAACTACTGAATAACATGAGAAGCCAGTATGAACAACTTGCTGA ACAAAACCGCAGAGACGCTGAAGCCTGGTTCAATGAAAAGAGCAAGGAACTGACTACAGA AATCAACACTAACATTGAACAGGTGTCCAGCTATAAATCTGAGATTACTGAGTTGAGACG CACTATCCAAGGTCTGGAGATCGAGCTACAGTCCCAACTAGCCCTGAAACAATCCCTGGA AGCCTCCTTGGCAGAGACAGAAGGTCGCTACTGTGTGCAGCTCGCTCAGATTCAGTCCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 57-220, gnl|bosTau2|chr19 (33816651-33816814) | |
| 57-220, gnl|canFam2|chr9 (25194476-25194329) | |
| 57-220, gnl|canFam2|chr9 (25194420-25194279) | |
| 57-220, gnl|danRer3|chr11 (8150001-8149854) | |
| 57-220, gnl|danRer3|chr19 (1218132-1218272) | |
| 57-220, gnl|dasNov1|scaffold_160677 (3010-3151) | |
| 57-220, gnl|dasNov1|scaffold_91952 (2742-2619) | |
| 57-220, gnl|echTel1|scaffold_294049 (9811-10016) | |
| 57-220, gnl|echTel1|scaffold_319302 (63624-63484) | |
| 57-220, gnl|fr1|chrUn (253387732-253387587) | |
| 57-220, gnl|galGal2|chr27_random (591666-591519) | |
| 57-220, gnl|galGal2|chr27_random (591610-591460) | |
| 57-220, gnl|hg17|chr17 (36129660-36129809) | |
| 57-220, gnl|hg17|chr17 (36230080-36230221) | |
| 57-220, gnl|Hg17|chr17 (36230203-36230040) | |
| 57-220, gnl|loxAfr1|scaffold_16243 (3627-3488) | |
| 57-220, gnl|loxAfr1|scaffold_41873 (5974-5838) | |
| 57-220, gnl|mm7|chr11 (99496259-99496400) | |
| 57-220, gnl|mm7|chr11 (99496309-99496450) | |
| 57-220, gnl|Mm7|chr11 (99496432-99496269) | |
| 57-220, gnl|monDom2|scaffold_18 (50115057-50115194) | |
| 57-220, gnl|monDom2|scaffold_18 (50311411-50311550) | |
| 57-220, gnl|oryCun1|scaffold_203191 (5448-5315) | |
| 57-220, gnl|oryCun1|scaffold_89309 (4276-4135) | |
| 57-220, gnl|panTro1|chr19 (39376698-39376847) | |
| 57-220, gnl|panTro1|chr19 (39478803-39478944) | |
| 57-220, gnl|rheMac2|chr16 (50837762-50837909) | |
| 57-220, gnl|rheMac2|chr16 (50937505-50937646) | |
| 57-220, gnl|rn3|chr10 (88304617-88304760) | |
| 57-220, gnl|rn3|chr10 (88304669-88304810) | |
| 57-220, gnl|tetNig1|chr18 (5127545-5127682) | |
| 57-220, gnl|xenTro1|scaffold_574 (365992-365848) | |
| 57-220, gnl|xenTro1|scaffold_574 (181026-180885) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 57-220, gnl|bosTau2|chr19 (33816651-33816814) | |
| 57-220, gnl|canFam2|chr9 (25194476-25194329) | |
| 57-220, gnl|canFam2|chr9 (25194420-25194279) | |
| 57-220, gnl|danRer3|chr11 (8150001-8149854) | |
| 57-220, gnl|danRer3|chr19 (1218132-1218272) | |
| 57-220, gnl|dasNov1|scaffold_160677 (3010-3151) | |
| 57-220, gnl|dasNov1|scaffold_91952 (2742-2619) | |
| 57-220, gnl|echTel1|scaffold_294049 (9811-10016) | |
| 57-220, gnl|echTel1|scaffold_319302 (63624-63484) | |
| 57-220, gnl|fr1|chrUn (253387732-253387587) | |
| 57-220, gnl|galGal2|chr27_random (591666-591519) | |
| 57-220, gnl|galGal2|chr27_random (591610-591460) | |
| 57-220, gnl|hg17|chr17 (36129660-36129809) | |
| 57-220, gnl|hg17|chr17 (36230080-36230221) | |
| 57-220, gnl|Hg17|chr17 (36230203-36230040) | |
| 57-220, gnl|loxAfr1|scaffold_16243 (3627-3488) | |
| 57-220, gnl|loxAfr1|scaffold_41873 (5974-5838) | |
| 57-220, gnl|mm7|chr11 (99496259-99496400) | |
| 57-220, gnl|mm7|chr11 (99496309-99496450) | |
| 57-220, gnl|Mm7|chr11 (99496432-99496269) | |
| 57-220, gnl|monDom2|scaffold_18 (50115057-50115194) | |
| 57-220, gnl|monDom2|scaffold_18 (50311411-50311550) | |
| 57-220, gnl|oryCun1|scaffold_203191 (5448-5315) | |
| 57-220, gnl|oryCun1|scaffold_89309 (4276-4135) | |
| 57-220, gnl|panTro1|chr19 (39376698-39376847) | |
| 57-220, gnl|panTro1|chr19 (39478803-39478944) | |
| 57-220, gnl|rheMac2|chr16 (50837762-50837909) | |
| 57-220, gnl|rheMac2|chr16 (50937505-50937646) | |
| 57-220, gnl|rn3|chr10 (88304617-88304760) | |
| 57-220, gnl|rn3|chr10 (88304669-88304810) | |
| 57-220, gnl|tetNig1|chr18 (5127545-5127682) | |
| 57-220, gnl|xenTro1|scaffold_574 (365992-365848) | |
| 57-220, gnl|xenTro1|scaffold_574 (181026-180885) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.36785) | |
| eep (0.122564) |