Non-Coding RNA Search

Ss1.1-reep29c_c19.5

Sequence:


               
               TAGTAGAAATGCTATATTCATTTTGGAAGACCGCTATGTTTTAAGGCAAGTGTCACGCAT
ACAAAACGGTCAGAGATGCACAGTATTTACGTTAGAAGAGCAGACGAGACATCATCAGAC
AATGACAAAGTAGCATTTTCCCCAGCCAGGTCACGTGTGGTCTCGTCCCTCTTGTGGACA
GGGAGCCACCGGGAGAGGGGAGCTGCCATGGTCGGGATTTTAAACGGAAGCACCTTCCCC
AGACCAGGGTGCTCCAGGCCCAGCGCAGAGGATACGCAGTCCCGGGGTCCGATGGTCCGG
CTCTAATGTCCACGTTTTGTGAAATTCACCTTTAGAAACAGGAATATCCTGATGCCGAAG
CCATACACCACTGGCAGTTAGTTCACCTCTGTCCCAAATCAAACTTGCTTGGACTGGAGC
TAAAACACACACACACACACACACACACACACACACACACACGCCACACACACACACACA
CACACACGCCACACACACAGATAACCCCCCTATATAGGCTACACATATGTATGTATATAT
AAAACTGTATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGTAGAAATGCTATATTCATTTTGGAAGACCGCTATGTTTTAAGGCAAGTGTCACGCAT
ACAAAACGGTCAGAGATGCACAGTATTTACGTTAGAAGAGCAGACGAGACATCATCAGAC
AATGACAAAGTAGCATTTTCCCCAGCCAGGTCACGTGTGGTCTCGTCCCTCTTGTGGACA
GGGAGCCACCGGGAGAGGGGAGCTGCCATGGTCGGGATTTTAAACGGAAGCACCTTCCCC
AGACCAGGGTGCTCCAGGCCCAGCGCAGAGGATACGCAGTCCCGGGGTCCGATGGTCCGG
CTCTAATGTCCACGTTTTGTGAAATTCACCTTTAGAAACAGGAATATCCTGATGCCGAAG
CCATACACCACTGGCAGTTAGTTCACCTCTGTCCCAAATCAAACTTGCTTGGACTGGAGC
TAAAACACACACACACACACACACACACACACACACACACACGCCACACACACACACACA
CACACACGCCACACACACAGATAACCCCCCTATATAGGCTACACATATGTATGTATATAT
AAAACTGTATAT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q5BT08_SCHJA

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5BT08_SCHJA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-439, gnl|bosTau2|chr11 (41643882-41643438)
               

               
               1-439, gnl|Hg17|chr2 (65162647-65162128)
               

               
               1-439, gnl|Mm7|chr11 (20254191-20254637)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-439, gnl|bosTau2|chr11 (41643882-41643438)
               

               
               1-439, gnl|Hg17|chr2 (65162647-65162128)
               

               
               1-439, gnl|Mm7|chr11 (20254191-20254637)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               fce (0.271592)
               

               
               fbs (0.175346)
               

               
               pty (0.142714)
               

               
               eep (0.122564)
               

               
               cly (0.120642)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               fbs (0.175346)
               

               
               pty (0.142714)
               

               
               eep (0.122564)
               

               
               cly (0.120642)

	1-439, gnl\|bosTau2\|chr11 (41643882-41643438)
	1-439, gnl\|Hg17\|chr2 (65162647-65162128)
	1-439, gnl\|Mm7\|chr11 (20254191-20254637)

	fce (0.271592)
	fbs (0.175346)
	pty (0.142714)
	eep (0.122564)
	cly (0.120642)