Ss1.1-reep29c_o7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGGACCGGCCTGCCGCCTTCATGTCTACGCTGCTCATCAATCAGCCCCAGTATGCTTG GCTCAAGGAGCTGGGGCTCCGCGAGGAAAATGAGGGCGTGTATAACGGAAGCTGGGGAGG CCGGGGAGAGGTTATCACCACCTATTGTCCTGCTAACAATGAGCCCATAGCCAGAGTCAG ACAGGCCAGCGCGGCTGACTATGAAGAAACTGTAAAGAAAGCAAGAGAAGCTTGGAGGAT CTGGGCAGATATTCCTGCTCCAAAGCGAGGAGAAATAGTGAGACAGATCGGTGATGCCTT GCGGGAGAAGATCCAAGTACTAGGAAGCCTGGTGTCTTTGGAGATGGGGAAAATCTTGGT GGAAGGTGTGGGAGAAGTTCAAGAGTACGTGGATATTTGTGACTATGCTGTTGGCTTGTC TCGGATGATCGGGGGACCCATCCTGCCTTCTGAAAGACCTGGCCACGCGCTCATCGAGCA GTGGAATCCCGTAGGCCTGGTCGGAATCATCACTGCATTCAACTTCCCCGTGGCAGTGTA CGGCTGGAACAACGCCATCGCCATGATCTGCGGGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGGACCGGCCTGCCGCCTTCATGTCTACGCTGCTCATCAATCAGCCCCAGTATGCTTG GCTCAAGGAGCTGGGGCTCCGCGAGGAAAATGAGGGCGTGTATAACGGAAGCTGGGGAGG CCGGGGAGAGGTTATCACCACCTATTGTCCTGCTAACAATGAGCCCATAGCCAGAGTCAG ACAGGCCAGCGCGGCTGACTATGAAGAAACTGTAAAGAAAGCAAGAGAAGCTTGGAGGAT CTGGGCAGATATTCCTGCTCCAAAGCGAGGAGAAATAGTGAGACAGATCGGTGATGCCTT GCGGGAGAAGATCCAAGTACTAGGAAGCCTGGTGTCTTTGGAGATGGGGAAAATCTTGGT GGAAGGTGTGGGAGAAGTTCAAGAGTACGTGGATATTTGTGACTATGCTGTTGGCTTGTC TCGGATGATCGGGGGACCCATCCTGCCTTCTGAAAGACCTGGCCACGCGCTCATCGAGCA GTGGAATCCCGTAGGCCTGGTCGGAATCATCACTGCATTCAACTTCCCCGTGGCAGTGTA CGGCTGGAACAACGCCATCGCCATGATCTGCGGGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 2-132, gnl|bosTau2|chr7 (23390212-23390342) | |
| 2-132, gnl|Hg17|chr5 (125958726-125958596) | |
| 2-132, gnl|Mm7|chr18 (56943783-56943653) | |
| 331-456, gnl|bosTau2|chr7 (23399600-23399725) | |
| 331-456, gnl|canFam2|chr11 (18872964-18872840) | |
| 331-456, gnl|danRer3|chr10 (430774-430898) | |
| 331-456, gnl|dasNov1|scaffold_17919 (40598-40474) | |
| 331-456, gnl|echTel1|scaffold_295098 (10642-10764) | |
| 331-456, gnl|fr1|chrUn (100468580-100468456) | |
| 331-456, gnl|hg17|chr5 (76622158-76622282) | |
| 331-456, gnl|Hg17|chr5 (125946566-125946441) | |
| 331-456, gnl|mm7|chr18 (56932040-56931919) | |
| 331-456, gnl|Mm7|chr18 (56932042-56931917) | |
| 331-456, gnl|monDom2|scaffold_34 (1905910-1905786) | |
| 331-456, gnl|oryCun1|scaffold_16258 (1172-1053) | |
| 331-456, gnl|panTro1|chr4 (38781857-38781735) | |
| 331-456, gnl|rheMac2|chr14 (68343335-68343459) | |
| 331-456, gnl|rn3|chr18 (52369978-52369857) | |
| 331-456, gnl|tetNig1|chr1 (11927049-11927173) | |
| 331-456, gnl|xenTro1|scaffold_2 (3513284-3513400) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-132, gnl|bosTau2|chr7 (23390212-23390342) | |
| 2-132, gnl|Hg17|chr5 (125958726-125958596) | |
| 2-132, gnl|Mm7|chr18 (56943783-56943653) | |
| 331-456, gnl|bosTau2|chr7 (23399600-23399725) | |
| 331-456, gnl|canFam2|chr11 (18872964-18872840) | |
| 331-456, gnl|danRer3|chr10 (430774-430898) | |
| 331-456, gnl|dasNov1|scaffold_17919 (40598-40474) | |
| 331-456, gnl|echTel1|scaffold_295098 (10642-10764) | |
| 331-456, gnl|fr1|chrUn (100468580-100468456) | |
| 331-456, gnl|hg17|chr5 (76622158-76622282) | |
| 331-456, gnl|Hg17|chr5 (125946566-125946441) | |
| 331-456, gnl|mm7|chr18 (56932040-56931919) | |
| 331-456, gnl|Mm7|chr18 (56932042-56931917) | |
| 331-456, gnl|monDom2|scaffold_34 (1905910-1905786) | |
| 331-456, gnl|oryCun1|scaffold_16258 (1172-1053) | |
| 331-456, gnl|panTro1|chr4 (38781857-38781735) | |
| 331-456, gnl|rheMac2|chr14 (68343335-68343459) | |
| 331-456, gnl|rn3|chr18 (52369978-52369857) | |
| 331-456, gnl|tetNig1|chr1 (11927049-11927173) | |
| 331-456, gnl|xenTro1|scaffold_2 (3513284-3513400) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.245128) | |
| nlu (0.191681) | |
| eru (0.120048) |