Ss1.1-reep31c_e18.5
|
TTGGCATCCTGGTGTACACAGATCCAGCAGGTCTGCGCACCTACCTCGCTGCCCAGGTGA
CAGAACAGAGCCCGCTGGGCGAGGGAGCCCTGGCCCCCATGCCTGTGCCTAGTGGTGTGC
TGCCTGCCAGTCACCCGGACCCTGCCTTCTCCATCTTCCCACCTGAAGCCCCGAAGTTAC
TTGAGAACCAGACATTGCCAGGGGAGCCGCCTGAGCCGGGGGGTCAGGCAGAGGGCGTCC
ATGACAGCCCAGCCCCAGAGGTAACCTGGGGGCCTGAGGATGAGGAACTTTGGAGGAAAT
TGTCCTTCCGCCACTGGCCAACGCTCTTCAGCTACTACAACATCACACTGGCCAAGAGGT
ATATCAGCCTGCTTCCTGTCATCCCGGTTACGCTCCGTCTGAACCCGAGGGAGGCCCTGG
AGGGTCGGCACCCTCAGGATAGCCGCAGTGCGTGGTCCCCGCCGCAGCCCGCGCAGGGTG
GGCTCTGGGATGCTGGCCCCAAGGGGCCAGGCGTGGCACAGGCGCATAGAGACGTCACCC
TGTACAAGGTGGCAGCACTCGGCCTGGCCACGGGCATCCTCCTCGTGCTGCTGCTACTCT
GCCTGTACCGCGTGCTCTGCCCTCGCAACTACGGGCAGCCTGGTGCAGGGCCCGGCCGGC
GGCGGCGTGGGGAGCTGCCCTGTGATGACTACGGCTATGCACCGCCTGAAACAGAAATCG
TGCCCCTGGTGCTGAGAGGGCACCTCATGGACATTGAATGTCTGGCCAGCGACGGCATGC
TGCTGGTGAGCTGTTGCCTGGCGGGCCACGTGTGTGTGTGGGATGCACAGACCGGGGACT |
Blue-coloured subsequences are predicted RNA structures by RNAz
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TTGGCATCCTGGTGTACACAGATCCAGCAGGTCTGCGCACCTACCTCGCTGCCCAGGTGA
CAGAACAGAGCCCGCTGGGCGAGGGAGCCCTGGCCCCCATGCCTGTGCCTAGTGGTGTGC
TGCCTGCCAGTCACCCGGACCCTGCCTTCTCCATCTTCCCACCTGAAGCCCCGAAGTTAC
TTGAGAACCAGACATTGCCAGGGGAGCCGCCTGAGCCGGGGGGTCAGGCAGAGGGCGTCC
ATGACAGCCCAGCCCCAGAGGTAACCTGGGGGCCTGAGGATGAGGAACTTTGGAGGAAAT
TGTCCTTCCGCCACTGGCCAACGCTCTTCAGCTACTACAACATCACACTGGCCAAGAGGT
ATATCAGCCTGCTTCCTGTCATCCCGGTTACGCTCCGTCTGAACCCGAGGGAGGCCCTGG
AGGGTCGGCACCCTCAGGATAGCCGCAGTGCGTGGTCCCCGCCGCAGCCCGCGCAGGGTG
GGCTCTGGGATGCTGGCCCCAAGGGGCCAGGCGTGGCACAGGCGCATAGAGACGTCACCC
TGTACAAGGTGGCAGCACTCGGCCTGGCCACGGGCATCCTCCTCGTGCTGCTGCTACTCT
GCCTGTACCGCGTGCTCTGCCCTCGCAACTACGGGCAGCCTGGTGCAGGGCCCGGCCGGC
GGCGGCGTGGGGAGCTGCCCTGTGATGACTACGGCTATGCACCGCCTGAAACAGAAATCG
TGCCCCTGGTGCTGAGAGGGCACCTCATGGACATTGAATGTCTGGCCAGCGACGGCATGC
TGCTGGTGAGCTGTTGCCTGGCGGGCCACGTGTGTGTGTGGGATGCACAGACCGGGGACT |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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143-295, - strand, RNAmicro p=0.985905 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
143-295, - strand, RNAmicro p=0.985905 |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map