Ss1.1-reep32c_j10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGATGCAAAGCCCAGGCCCACACAAAGGAGGTCGGAAGGACTGCGGCAAATAAAATCAA GGAACAATGTCCCCTAGAGGCAGGGCTGCACAGTAGCAGCAAAGTGACAATTCACGAATG TGACGAAGGGTCAGAACCCTTGGGGTTCTGGGACGCGTTGGGGCGGAGAGACCGGAAAGC CTACGACTGCATGCTTCAAGATCCTGGAAATTTTAACTTCACACCCCGCCTGTTCATCCT CAGCAGCTCTTCTGGTGATTTCTCAGCCACGGAGTTCATGTACCCTGCCCGAGACCCCTC TGTGGTCAATTCCATGCCCTTCTTGCAGGAAGACCTGTACAGCGCCCCCCAGCCAGCACT TTTCCTCGTGGACAATCACCACGAGGTGTACCTCTGGCAAGGCTGGTGGCCCATCGAGAA CAAGATCACCGGCTCCGCCCGCATCCGCTGGGCTTCCGACCGGAAGAGCGCCATGGAGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGATGCAAAGCCCAGGCCCACACAAAGGAGGTCGGAAGGACTGCGGCAAATAAAATCAA GGAACAATGTCCCCTAGAGGCAGGGCTGCACAGTAGCAGCAAAGTGACAATTCACGAATG TGACGAAGGGTCAGAACCCTTGGGGTTCTGGGACGCGTTGGGGCGGAGAGACCGGAAAGC CTACGACTGCATGCTTCAAGATCCTGGAAATTTTAACTTCACACCCCGCCTGTTCATCCT CAGCAGCTCTTCTGGTGATTTCTCAGCCACGGAGTTCATGTACCCTGCCCGAGACCCCTC TGTGGTCAATTCCATGCCCTTCTTGCAGGAAGACCTGTACAGCGCCCCCCAGCCAGCACT TTTCCTCGTGGACAATCACCACGAGGTGTACCTCTGGCAAGGCTGGTGGCCCATCGAGAA CAAGATCACCGGCTCCGCCCGCATCCGCTGGGCTTCCGACCGGAAGAGCGCCATGGAGAC |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 198-356, gnl|bosTau2|chr13 (21118676-21118834) | |
| 198-356, gnl|canFam2|chr2 (18898057-18898250) | |
| 198-356, gnl|canFam2|chr2 (18898241-18898060) | |
| 198-356, gnl|danRer3|chr12 (20411988-20411813) | |
| 198-356, gnl|danRer3|chr12 (20411812-20411997) | |
| 198-356, gnl|dasNov1|scaffold_150078 (1618-1811) | |
| 198-356, gnl|dasNov1|scaffold_150078 (1802-1611) | |
| 198-356, gnl|echTel1|scaffold_199353 (5426-5241) | |
| 198-356, gnl|echTel1|scaffold_199353 (5248-5431) | |
| 198-356, gnl|fr1|chrUn (280058064-280058238) | |
| 198-356, gnl|fr1|chrUn (280058259-280058064) | |
| 198-356, gnl|galGal2|chr2 (14016398-14016596) | |
| 198-356, gnl|galGal2|chr2 (14016586-14016405) | |
| 198-356, gnl|hg17|chr10 (29794517-29794716) | |
| 198-356, gnl|hg17|chr10 (31038213-31038403) | |
| 198-356, gnl|Hg17|chr10 (29794688-29794530) | |
| 198-356, gnl|loxAfr1|scaffold_778 (118299-118100) | |
| 198-356, gnl|loxAfr1|scaffold_778 (118109-118299) | |
| 198-356, gnl|mm7|chr18 (5280629-5280430) | |
| 198-356, gnl|mm7|chr18 (5280439-5280629) | |
| 198-356, gnl|Mm7|chr18 (5280456-5280614) | |
| 198-356, gnl|monDom2|scaffold_7 (37755312-37755501) | |
| 198-356, gnl|monDom2|scaffold_7 (37755501-37755319) | |
| 198-356, gnl|oryCun1|scaffold_90019 (733-540) | |
| 198-356, gnl|oryCun1|scaffold_90019 (549-730) | |
| 198-356, gnl|panTro1|chr8 (31430824-31431014) | |
| 198-356, gnl|panTro1|chr8_random (18219035-18218836) | |
| 198-356, gnl|rheMac2|chr9 (29605531-29605730) | |
| 198-356, gnl|rheMac2|chr9 (30932982-30933172) | |
| 198-356, gnl|rn3|chr17 (60913162-60913361) | |
| 198-356, gnl|rn3|chr17 (60913352-60913162) | |
| 198-356, gnl|tetNig1|chrUn_random (134431193-134431022) | |
| 198-356, gnl|tetNig1|chrUn_random (134431022-134431193) | |
| 198-356, gnl|xenTro1|scaffold_406 (572289-572113) | |
| 198-356, gnl|xenTro1|scaffold_406 (572113-572289) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 198-356, gnl|bosTau2|chr13 (21118676-21118834) | |
| 198-356, gnl|canFam2|chr2 (18898057-18898250) | |
| 198-356, gnl|canFam2|chr2 (18898241-18898060) | |
| 198-356, gnl|danRer3|chr12 (20411988-20411813) | |
| 198-356, gnl|danRer3|chr12 (20411812-20411997) | |
| 198-356, gnl|dasNov1|scaffold_150078 (1618-1811) | |
| 198-356, gnl|dasNov1|scaffold_150078 (1802-1611) | |
| 198-356, gnl|echTel1|scaffold_199353 (5426-5241) | |
| 198-356, gnl|echTel1|scaffold_199353 (5248-5431) | |
| 198-356, gnl|fr1|chrUn (280058064-280058238) | |
| 198-356, gnl|fr1|chrUn (280058259-280058064) | |
| 198-356, gnl|galGal2|chr2 (14016398-14016596) | |
| 198-356, gnl|galGal2|chr2 (14016586-14016405) | |
| 198-356, gnl|hg17|chr10 (29794517-29794716) | |
| 198-356, gnl|hg17|chr10 (31038213-31038403) | |
| 198-356, gnl|Hg17|chr10 (29794688-29794530) | |
| 198-356, gnl|loxAfr1|scaffold_778 (118299-118100) | |
| 198-356, gnl|loxAfr1|scaffold_778 (118109-118299) | |
| 198-356, gnl|mm7|chr18 (5280629-5280430) | |
| 198-356, gnl|mm7|chr18 (5280439-5280629) | |
| 198-356, gnl|Mm7|chr18 (5280456-5280614) | |
| 198-356, gnl|monDom2|scaffold_7 (37755312-37755501) | |
| 198-356, gnl|monDom2|scaffold_7 (37755501-37755319) | |
| 198-356, gnl|oryCun1|scaffold_90019 (733-540) | |
| 198-356, gnl|oryCun1|scaffold_90019 (549-730) | |
| 198-356, gnl|panTro1|chr8 (31430824-31431014) | |
| 198-356, gnl|panTro1|chr8_random (18219035-18218836) | |
| 198-356, gnl|rheMac2|chr9 (29605531-29605730) | |
| 198-356, gnl|rheMac2|chr9 (30932982-30933172) | |
| 198-356, gnl|rn3|chr17 (60913162-60913361) | |
| 198-356, gnl|rn3|chr17 (60913352-60913162) | |
| 198-356, gnl|tetNig1|chrUn_random (134431193-134431022) | |
| 198-356, gnl|tetNig1|chrUn_random (134431022-134431193) | |
| 198-356, gnl|xenTro1|scaffold_406 (572289-572113) | |
| 198-356, gnl|xenTro1|scaffold_406 (572113-572289) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) | |
| eje (0.0988338) |