Ss1.1-reep32c_m9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCCAGGGGGGCCAGGGAGACCACGAGGACCAGAAGGACCCATGGGGCCGGGCACGGAA ATTCCTGCTGACTTCTCATCATAGCCATAAGACAACTGGGGAGCAAAGTTTCCTCCGAGG CCAGGGGGTCCGGGGGGTCCAGGAGGTCCGGGGGGTCCAGGAAGTCCAGGTTGTCCAGGG ATGCCGTCTCGGCCAGGGGGGCCAGAGGGTCCCCTGGGGCCTCGGGGGCCAGTGTCTCCC TTGGGTCCCTCGACTCCCGTGGTTTCCTGGTCGGTGGGTGACACCTCGCCTTCGGGGCAG ACGGGGCAGCACTCGCCCGCAGGGACTCTGGCGCTGGGACAGTTCTTGATTTCGTCGCAG ATCACGTCATCGCACAACACATTGCCGTTGTCGCAGACACAGATCTGGCAGGGCACGGGT TTCCACACGTCTCGGTCATGGTACCTGAGGCCGTTCTGTACGCAGGTGACTGGTGGGATG TCTTCTTCTTGGCCTTGTTGGCCTTCTTCTTGGCCCTCCTCTTGGCCGTGCGTCAGGAGG GCGGTGGCCGCTAAGAGGAGCAGGAGCCGGAGGTCCACAAAGCTGAACATGTCTAGACCC TAGACATGTAGACTCTTTGCGGCTGGGGTGGGGGTTAGCGTCCGCTCATGCGTGGCCTCA CACTCCGCGTGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCCAGGGGGGCCAGGGAGACCACGAGGACCAGAAGGACCCATGGGGCCGGGCACGGAA ATTCCTGCTGACTTCTCATCATAGCCATAAGACAACTGGGGAGCAAAGTTTCCTCCGAGG CCAGGGGGTCCGGGGGGTCCAGGAGGTCCGGGGGGTCCAGGAAGTCCAGGTTGTCCAGGG ATGCCGTCTCGGCCAGGGGGGCCAGAGGGTCCCCTGGGGCCTCGGGGGCCAGTGTCTCCC TTGGGTCCCTCGACTCCCGTGGTTTCCTGGTCGGTGGGTGACACCTCGCCTTCGGGGCAG ACGGGGCAGCACTCGCCCGCAGGGACTCTGGCGCTGGGACAGTTCTTGATTTCGTCGCAG ATCACGTCATCGCACAACACATTGCCGTTGTCGCAGACACAGATCTGGCAGGGCACGGGT TTCCACACGTCTCGGTCATGGTACCTGAGGCCGTTCTGTACGCAGGTGACTGGTGGGATG TCTTCTTCTTGGCCTTGTTGGCCTTCTTCTTGGCCCTCCTCTTGGCCGTGCGTCAGGAGG GCGGTGGCCGCTAAGAGGAGCAGGAGCCGGAGGTCCACAAAGCTGAACATGTCTAGACCC TAGACATGTAGACTCTTTGCGGCTGGGGTGGGGGTTAGCGTCCGCTCATGCGTGGCCTCA CACTCCGCGTGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 494-672, + strand, RNAz p=0.951017 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 494-672, + strand, RNAz p=0.951017 |
| Aligned organism(s): 9 entry(ies) | More info |
| Aligned organism(s): 9 entry(ies) | Help | Less info |
| 111-220, gnl|bosTau2|chr19 (29174861-29174753) | |
| 111-220, gnl|Hg17|chr17 (45631586-45631694) | |
| 111-220, gnl|Mm7|chr11 (95047644-95047536) | |
| 284-478, gnl|bosTau2|chr19 (29174342-29174148) | |
| 284-478, gnl|Hg17|chr17 (45632113-45632307) | |
| 284-478, gnl|Mm7|chr11 (95047143-95046949) | |
| 494-672, gnl|bosTau2|chr19 (29172653-29172475) | |
| 494-672, gnl|Hg17|chr17 (45633777-45633955) | |
| 494-672, gnl|Mm7|chr11 (95045478-95045327) |
| Aligned organism(s): 9 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 111-220, gnl|bosTau2|chr19 (29174861-29174753) | |
| 111-220, gnl|Hg17|chr17 (45631586-45631694) | |
| 111-220, gnl|Mm7|chr11 (95047644-95047536) | |
| 284-478, gnl|bosTau2|chr19 (29174342-29174148) | |
| 284-478, gnl|Hg17|chr17 (45632113-45632307) | |
| 284-478, gnl|Mm7|chr11 (95047143-95046949) | |
| 494-672, gnl|bosTau2|chr19 (29172653-29172475) | |
| 494-672, gnl|Hg17|chr17 (45633777-45633955) | |
| 494-672, gnl|Mm7|chr11 (95045478-95045327) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.490256) |