Ss1.1-reep33c_h11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACCTGAAGGAGCCCCTGTACGTTGGGGGCGCCCCCGACTTCAGCAGGCTGGCCCGGGCA GCCGCCGTGTCCTCTGGCTTCGATGGTGCCATCCAGCTGGTCGCCCTGAACGGCCGCCAG CTGCTGACCCGGGAGCACGTGGTGCAGGCAGTGGACGTCTCGTCCTTTGCAGACCACCCT TGTACCCAGGCCGCGGGCCACCCTTGCCTCAACGGAGCCTCCTGTCTCCCTCGGGGGGCC TCCTATGAGTGCCTGTGTCCTGGGGGCTTCTCAGGGCTGCACTGTGAGAAGGGCCTGATT GAGAAGTCAGCAGGGGACCTGGACGCACTGGCCTTTGATGGACGGACCTACGTCGAGTAC CTCAATGCCGTGACTGAGAGCGAGAAGGCGCTGCAGAGCAACCACTTTGAGCTGAGTCTG CGCACGGAGGCCACGCAGGGGCTGGTGCTGTGGAGTGGCAAGGCCACGGAGCGGGCCGAC TATATCGCCCTGGCCATCGTGGATGGACACCTGCAGCTGACTTACGACCTGGGCTCCCAG CCTGTGGTGCTGCGCTCCACCGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACCTGAAGGAGCCCCTGTACGTTGGGGGCGCCCCCGACTTCAGCAGGCTGGCCCGGGCA GCCGCCGTGTCCTCTGGCTTCGATGGTGCCATCCAGCTGGTCGCCCTGAACGGCCGCCAG CTGCTGACCCGGGAGCACGTGGTGCAGGCAGTGGACGTCTCGTCCTTTGCAGACCACCCT TGTACCCAGGCCGCGGGCCACCCTTGCCTCAACGGAGCCTCCTGTCTCCCTCGGGGGGCC TCCTATGAGTGCCTGTGTCCTGGGGGCTTCTCAGGGCTGCACTGTGAGAAGGGCCTGATT GAGAAGTCAGCAGGGGACCTGGACGCACTGGCCTTTGATGGACGGACCTACGTCGAGTAC CTCAATGCCGTGACTGAGAGCGAGAAGGCGCTGCAGAGCAACCACTTTGAGCTGAGTCTG CGCACGGAGGCCACGCAGGGGCTGGTGCTGTGGAGTGGCAAGGCCACGGAGCGGGCCGAC TATATCGCCCTGGCCATCGTGGATGGACACCTGCAGCTGACTTACGACCTGGGCTCCCAG CCTGTGGTGCTGCGCTCCACCGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 99-293, gnl|bosTau2|chr16 (41243621-41243427) | |
| 99-293, gnl|Hg17|chr1 (1026755-1026949) | |
| 99-293, gnl|Mm7|chr4 (155158638-155158444) | |
| 379-563, gnl|bosTau2|chr16 (41242032-41241848) | |
| 379-563, gnl|canFam2|chr5 (59272391-59272639) | |
| 379-563, gnl|danRer3|chr23 (33369672-33369431) | |
| 379-563, gnl|echTel1|scaffold_295486 (1889-2114) | |
| 379-563, gnl|fr1|chrUn (35097111-35096862) | |
| 379-563, gnl|galGal2|chr21 (2607226-2606972) | |
| 379-563, gnl|hg17|chr1 (1029038-1029286) | |
| 379-563, gnl|Hg17|chr1 (1029054-1029238) | |
| 379-563, gnl|loxAfr1|scaffold_156686 (4232-3988) | |
| 379-563, gnl|mm7|chr4 (155157069-155156820) | |
| 379-563, gnl|Mm7|chr4 (155157050-155156866) | |
| 379-563, gnl|monDom2|scaffold_416 (39556-39804) | |
| 379-563, gnl|oryCun1|scaffold_113170 (1599-1839) | |
| 379-563, gnl|panTro1|chrUn_random (64981689-64981441) | |
| 379-563, gnl|rheMac2|chr1 (4128653-4128901) | |
| 379-563, gnl|rn3|chr5 (173012206-173011957) | |
| 379-563, gnl|tetNig1|chrUn_random (27754873-27754626) | |
| 379-563, gnl|xenTro1|scaffold_715 (226084-225841) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 99-293, gnl|bosTau2|chr16 (41243621-41243427) | |
| 99-293, gnl|Hg17|chr1 (1026755-1026949) | |
| 99-293, gnl|Mm7|chr4 (155158638-155158444) | |
| 379-563, gnl|bosTau2|chr16 (41242032-41241848) | |
| 379-563, gnl|canFam2|chr5 (59272391-59272639) | |
| 379-563, gnl|danRer3|chr23 (33369672-33369431) | |
| 379-563, gnl|echTel1|scaffold_295486 (1889-2114) | |
| 379-563, gnl|fr1|chrUn (35097111-35096862) | |
| 379-563, gnl|galGal2|chr21 (2607226-2606972) | |
| 379-563, gnl|hg17|chr1 (1029038-1029286) | |
| 379-563, gnl|Hg17|chr1 (1029054-1029238) | |
| 379-563, gnl|loxAfr1|scaffold_156686 (4232-3988) | |
| 379-563, gnl|mm7|chr4 (155157069-155156820) | |
| 379-563, gnl|Mm7|chr4 (155157050-155156866) | |
| 379-563, gnl|monDom2|scaffold_416 (39556-39804) | |
| 379-563, gnl|oryCun1|scaffold_113170 (1599-1839) | |
| 379-563, gnl|panTro1|chrUn_random (64981689-64981441) | |
| 379-563, gnl|rheMac2|chr1 (4128653-4128901) | |
| 379-563, gnl|rn3|chr5 (173012206-173011957) | |
| 379-563, gnl|tetNig1|chrUn_random (27754873-27754626) | |
| 379-563, gnl|xenTro1|scaffold_715 (226084-225841) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.367692) | |
| mcp (0.170648) |