Non-Coding RNA Search

Ss1.1-reep35c_a3.5

Sequence:


               
               AGGGAGCCTTCTAAATATGAATGAATGGGATATTTGGAAATGAACTTCTCCAGCATTGCC
TCTTGGCAGTGCTTCCGTAGCATCTCATTGGCGCAGGCAGGTTGGAGGGAGATGGACATG
GAAATAGATAATGGGCCACAGAAGATGAACTTTGTGTTTCAAGGGCATTGGTGAGAATCC
AACCTCCGCAACTTTTACGGCAAGAAAACTCCAGCGTTGTAACTATGTAAATAACTCTAA
CCAAGGATGTGTTTTGATTTGTGTTAACTATCTTCTCTGGACTTCTGGAGAGACCACTCA
ATCCATCCATGTACTTCCCGCTTGAAACTTGGTATCAGCTGCTGTTGAACTTTCTTACGA
AGTACATGCAAAACCACTTTTGAACCTTAAAAGGTACTGGTACTCTAGCATTTTACTTTT
TTTTTTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGGAGCCTTCTAAATATGAATGAATGGGATATTTGGAAATGAACTTCTCCAGCATTGCC
TCTTGGCAGTGCTTCCGTAGCATCTCATTGGCGCAGGCAGGTTGGAGGGAGATGGACATG
GAAATAGATAATGGGCCACAGAAGATGAACTTTGTGTTTCAAGGGCATTGGTGAGAATCC
AACCTCCGCAACTTTTACGGCAAGAAAACTCCAGCGTTGTAACTATGTAAATAACTCTAA
CCAAGGATGTGTTTTGATTTGTGTTAACTATCTTCTCTGGACTTCTGGAGAGACCACTCA
ATCCATCCATGTACTTCCCGCTTGAAACTTGGTATCAGCTGCTGTTGAACTTTCTTACGA
AGTACATGCAAAACCACTTTTGAACCTTAAAAGGTACTGGTACTCTAGCATTTTACTTTT
TTTTTTTTTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-432, gnl|bosTau2|chr6 (34542935-34542514)
               

               
               2-432, gnl|Hg17|chr4 (55002504-55002921)
               

               
               2-432, gnl|Mm7|chr5 (74613491-74613907)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-432, gnl|bosTau2|chr6 (34542935-34542514)
               

               
               2-432, gnl|Hg17|chr4 (55002504-55002921)
               

               
               2-432, gnl|Mm7|chr5 (74613491-74613907)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               bla (0.124347)
               

               
               eep (0.122564)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)
               

               
               eep (0.122564)
               

               
               jca (0.11396)

	2-432, gnl\|bosTau2\|chr6 (34542935-34542514)
	2-432, gnl\|Hg17\|chr4 (55002504-55002921)
	2-432, gnl\|Mm7\|chr5 (74613491-74613907)